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BST96_19090 BST96_19090 sdhB sdhB ARN76127.1 ARN76127.1 ARN76191.1 ARN76191.1 ARN74105.1 ARN74105.1 ARN74216.1 ARN74216.1 ARN74743.1 ARN74743.1 ARN74744.1 ARN74744.1 ARN74746.1 ARN74746.1 ARN74767.1 ARN74767.1 ARN74873.1 ARN74873.1 ARN74874.1 ARN74874.1 rnfG rnfG ARN75154.1 ARN75154.1 ARN75174.1 ARN75174.1 ARN75503.1 ARN75503.1 ARN75505.1 ARN75505.1 ARN76459.1 ARN76459.1 ARN75554.1 ARN75554.1 ARN74074.1 ARN74074.1 ARN74064.1 ARN74064.1 ARN74075.1 ARN74075.1 ARN74062.1 ARN74062.1 ARN74061.1 ARN74061.1 ARN76325.1 ARN76325.1 dsbB dsbB BST96_05645 BST96_05645 ARN73542.1 ARN73542.1 ARN73422.1 ARN73422.1 ARN73421.1 ARN73421.1 ARN73411.1 ARN73411.1 ARN73386.1 ARN73386.1 napA napA ARN73250.1 ARN73250.1 ARN76288.1 ARN76288.1 ARN73137.1 ARN73137.1 ARN73249.1 ARN73249.1 ARN73136.1 ARN73136.1 ARN73089.1 ARN73089.1 ARN73074.1 ARN73074.1 ARN72866.1 ARN72866.1 ARN72856.1 ARN72856.1 msrQ msrQ ARN72744.1 ARN72744.1 ARN72682.1 ARN72682.1 ARN75555.1 ARN75555.1 nqrF nqrF ARN75659.1 ARN75659.1 ARN76470.1 ARN76470.1 ARN75913.1 ARN75913.1 ARN75914.1 ARN75914.1 ARN75972.1 ARN75972.1 ARN75977.1 ARN75977.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BST96_19090Adenosylmethionine--8-amino-7-oxononanoate transaminase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
ARN76127.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ARN76191.1Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (57 aa)
ARN74105.1Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
ARN74216.1GrxA family glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
ARN74743.1Cytochrome-c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (480 aa)
ARN74744.1Cytochrome-c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
ARN74746.1Cytochrome-c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (298 aa)
ARN74767.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (703 aa)
ARN74873.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (199 aa)
ARN74874.1Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (744 aa)
rnfGElectron transport complex subunit RsxG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (214 aa)
ARN75154.1Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
ARN75174.1PQQ-dependent dehydrogenase, methanol/ethanol family; Derived by automated computational analysis using gene prediction method: Protein Homology. (739 aa)
ARN75503.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)
ARN75505.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
ARN76459.1Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (551 aa)
ARN75554.1Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
ARN74074.1Cytochrome c5 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
ARN74064.1Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
ARN74075.1Cytochrome c4; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
ARN74062.1Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (519 aa)
ARN74061.1Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (385 aa)
ARN76325.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (701 aa)
dsbBFlagellar basal body-associated protein FliL; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (160 aa)
BST96_05645Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
ARN73542.1Disulfide bond formation protein DsbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
ARN73422.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
ARN73421.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (196 aa)
ARN73411.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (105 aa)
ARN73386.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
napANitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (829 aa)
ARN73250.1Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
ARN76288.1Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
ARN73137.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (177 aa)
ARN73249.1Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
ARN73136.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
ARN73089.1Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
ARN73074.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
ARN72866.1NAD/FAD-utilizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
ARN72856.1Antitermination protein NusG; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
msrQSulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...] (196 aa)
ARN72744.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)
ARN72682.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
ARN75555.1Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
nqrFNADH:ubiquinone reductase (Na(+)-transporting) subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway. (405 aa)
ARN75659.1PQQ-dependent dehydrogenase, methanol/ethanol family; Derived by automated computational analysis using gene prediction method: Protein Homology. (697 aa)
ARN76470.1Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
ARN75913.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
ARN75914.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
ARN75972.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
ARN75977.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (386 aa)
Your Current Organism:
Oceanicoccus sagamiensis
NCBI taxonomy Id: 716816
Other names: KCTC 23278, NBRC 107125, O. sagamiensis, gamma proteobacterium PZ-5, strain PZ-5
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