STRINGSTRING
ARN72730.1 ARN72730.1 ARN72738.1 ARN72738.1 ARN72911.1 ARN72911.1 ARN72936.1 ARN72936.1 ARN73092.1 ARN73092.1 ARN76276.1 ARN76276.1 dapB dapB ARN73289.1 ARN73289.1 ARN73354.1 ARN73354.1 ARN73371.1 ARN73371.1 ARN73387.1 ARN73387.1 ARN73454.1 ARN73454.1 dusB dusB ARN73634.1 ARN73634.1 ARN73670.1 ARN73670.1 ARN76320.1 ARN76320.1 hemF hemF ARN74084.1 ARN74084.1 ARN74119.1 ARN74119.1 ARN74425.1 ARN74425.1 ARN74504.1 ARN74504.1 ARN76386.1 ARN76386.1 dusC dusC fabV fabV ARN75177.1 ARN75177.1 ARN75206.1 ARN75206.1 ARN75208.1 ARN75208.1 ARN75209.1 ARN75209.1 ARN75216.1 ARN75216.1 ARN75238.1 ARN75238.1 dusA dusA ARN75339.1 ARN75339.1 ARN75487.1 ARN75487.1 ARN75604.1 ARN75604.1 ARN75623.1 ARN75623.1 ARN75626.1 ARN75626.1 ARN75631.1 ARN75631.1 ARN75649.1 ARN75649.1 ARN76467.1 ARN76467.1 ARN75684.1 ARN75684.1 ARN75692.1 ARN75692.1 ARN75769.1 ARN75769.1 cysG cysG ARN75875.1 ARN75875.1 ARN76019.1 ARN76019.1 sdhB sdhB ARN76512.1 ARN76512.1 ARN76126.1 ARN76126.1 ARN76127.1 ARN76127.1 ARN76167.1 ARN76167.1 ARN76192.1 ARN76192.1 ARN76225.1 ARN76225.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARN72730.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
ARN72738.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
ARN72911.1Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
ARN72936.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (199 aa)
ARN73092.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
ARN76276.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (268 aa)
ARN73289.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
ARN73354.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
ARN73371.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
ARN73387.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
ARN73454.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
dusBtRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (350 aa)
ARN73634.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
ARN73670.1YggW family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (377 aa)
ARN76320.1Heme utilization protein HutZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
hemFCoproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (302 aa)
ARN74084.1UDP-N-acetyl-D-mannosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (410 aa)
ARN74119.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
ARN74425.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
ARN74504.1Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (425 aa)
ARN76386.1Oxygen-independent coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (475 aa)
dusCtRNA dihydrouridine(16) synthase DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (322 aa)
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (396 aa)
ARN75177.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
ARN75206.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
ARN75208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
ARN75209.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
ARN75216.1NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
ARN75238.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
dusAtRNA dihydrouridine(20/20a) synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (340 aa)
ARN75339.1Coenzyme F420-0:L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ARN75487.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
ARN75604.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
ARN75623.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
ARN75626.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
ARN75631.1NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
ARN75649.1NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
ARN76467.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
ARN75684.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
ARN75692.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
ARN75769.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
cysGuroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (460 aa)
ARN75875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
ARN76019.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
ARN76512.1Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (587 aa)
ARN76126.1Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (128 aa)
ARN76127.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ARN76167.1Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dihydroorotate dehydrogenase family. (544 aa)
ARN76192.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
ARN76225.1acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
Your Current Organism:
Oceanicoccus sagamiensis
NCBI taxonomy Id: 716816
Other names: KCTC 23278, NBRC 107125, O. sagamiensis, gamma proteobacterium PZ-5, strain PZ-5
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