STRINGSTRING
ARN72848.1 ARN72848.1 ARN73085.1 ARN73085.1 ARN73094.1 ARN73094.1 ARN76271.1 ARN76271.1 ARN73108.1 ARN73108.1 ARN73109.1 ARN73109.1 ARN73149.1 ARN73149.1 ARN73218.1 ARN73218.1 ARN73747.1 ARN73747.1 gabD gabD ARN74114.1 ARN74114.1 ARN74260.1 ARN74260.1 ARN75236.1 ARN75236.1 ARN75563.1 ARN75563.1 ARN75569.1 ARN75569.1 ARN75625.1 ARN75625.1 gabD-2 gabD-2 ARN75633.1 ARN75633.1 ARN75643.1 ARN75643.1 ARN75650.1 ARN75650.1 ARN75651.1 ARN75651.1 ARN75809.1 ARN75809.1 BST96_18790 BST96_18790 BST96_18985 BST96_18985 ARN76020.1 ARN76020.1 ARN76506.1 ARN76506.1 ARN76123.1 ARN76123.1 ARN76124.1 ARN76124.1 ARN76205.1 ARN76205.1 BST96_20245 BST96_20245
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARN72848.1D-alanine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
ARN73085.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (783 aa)
ARN73094.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (440 aa)
ARN76271.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
ARN73108.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
ARN73109.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
ARN73149.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
ARN73218.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
ARN73747.1Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
gabDSuccinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
ARN74114.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
ARN74260.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (505 aa)
ARN75236.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ARN75563.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
ARN75569.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
ARN75625.1Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
gabD-2Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
ARN75633.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
ARN75643.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
ARN75650.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
ARN75651.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (713 aa)
ARN75809.1Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
BST96_18790Putrescine ABC transporter permease PotI; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (466 aa)
BST96_18985Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ARN76020.1Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (714 aa)
ARN76506.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
ARN76123.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
ARN76124.1Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (398 aa)
ARN76205.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (484 aa)
BST96_20245Valine--pyruvate transaminase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
Your Current Organism:
Oceanicoccus sagamiensis
NCBI taxonomy Id: 716816
Other names: KCTC 23278, NBRC 107125, O. sagamiensis, gamma proteobacterium PZ-5, strain PZ-5
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