9 items (Oceanicoccus sagamiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hisC	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (352 aa)
	hisC-2	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (367 aa)
	gabD	Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	ARN76337.1	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	ARN74955.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
	BST96_14675	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
	BST96_14690	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	gabD-2	Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	ARN75903.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)

Your Current Organism:

Oceanicoccus sagamiensis

NCBI taxonomy Id: 716816
Other names: KCTC 23278, NBRC 107125, O. sagamiensis, gamma proteobacterium PZ-5, strain PZ-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARN74955.1	ARN75903.1	BST96_13020	BST96_18450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.904
ARN75903.1	ARN74955.1	BST96_18450	BST96_13020	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
ARN76337.1	BST96_14675	BST96_07795	BST96_14675	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ARN76337.1	BST96_14690	BST96_07795	BST96_14690	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ARN76337.1	hisC	BST96_07795	BST96_01470	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.932
ARN76337.1	hisC-2	BST96_07795	BST96_01605	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.923
BST96_14675	ARN76337.1	BST96_14675	BST96_07795	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
BST96_14675	BST96_14690	BST96_14675	BST96_14690	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
BST96_14675	hisC	BST96_14675	BST96_01470	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.909
BST96_14675	hisC-2	BST96_14675	BST96_01605	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.909
BST96_14690	ARN76337.1	BST96_14690	BST96_07795	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
BST96_14690	BST96_14675	BST96_14690	BST96_14675	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
BST96_14690	hisC	BST96_14690	BST96_01470	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.917
BST96_14690	hisC-2	BST96_14690	BST96_01605	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.917
gabD	gabD-2	BST96_06700	BST96_16850	Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
gabD-2	gabD	BST96_16850	BST96_06700	Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
hisC	ARN76337.1	BST96_01470	BST96_07795	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
hisC	BST96_14675	BST96_01470	BST96_14675	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
hisC	BST96_14690	BST96_01470	BST96_14690	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	2-keto-4-pentenoate hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
hisC	hisC-2	BST96_01470	BST96_01605	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.	0.907