STRINGSTRING
ARN72816.1 ARN72816.1 ARN72817.1 ARN72817.1 ARN73085.1 ARN73085.1 ARN76271.1 ARN76271.1 ARN73108.1 ARN73108.1 ARN73109.1 ARN73109.1 ARN73147.1 ARN73147.1 ARN73148.1 ARN73148.1 ARN73149.1 ARN73149.1 ARN73337.1 ARN73337.1 ARN73356.1 ARN73356.1 ARN73410.1 ARN73410.1 ARN73457.1 ARN73457.1 ARN73828.1 ARN73828.1 gabD gabD ARN73831.1 ARN73831.1 ARN74114.1 ARN74114.1 ARN74260.1 ARN74260.1 ARN74605.1 ARN74605.1 ARN74835.1 ARN74835.1 fabV fabV ARN75093.1 ARN75093.1 ARN75236.1 ARN75236.1 ARN75307.1 ARN75307.1 ARN75452.1 ARN75452.1 ARN75453.1 ARN75453.1 ARN75563.1 ARN75563.1 ARN75568.1 ARN75568.1 ARN75569.1 ARN75569.1 gabD-2 gabD-2 ARN75632.1 ARN75632.1 ARN75633.1 ARN75633.1 ARN75650.1 ARN75650.1 ARN75651.1 ARN75651.1 ARN76474.1 ARN76474.1 ARN75719.1 ARN75719.1 BST96_18790 BST96_18790 BST96_18985 BST96_18985 ARN76020.1 ARN76020.1 ARN76506.1 ARN76506.1 sdhB sdhB ARN76512.1 ARN76512.1 ARN76126.1 ARN76126.1 ARN76127.1 ARN76127.1 ARN76143.1 ARN76143.1 ARN76221.1 ARN76221.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARN72816.1Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
ARN72817.1Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
ARN73085.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (783 aa)
ARN76271.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
ARN73108.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
ARN73109.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
ARN73147.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
ARN73148.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
ARN73149.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
ARN73337.1hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
ARN73356.1hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
ARN73410.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (645 aa)
ARN73457.1Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ARN73828.1Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
gabDSuccinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
ARN73831.1Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
ARN74114.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
ARN74260.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (505 aa)
ARN74605.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
ARN74835.1Oxaloacetate decarboxylase subunit beta; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (434 aa)
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (396 aa)
ARN75093.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (243 aa)
ARN75236.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ARN75307.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
ARN75452.1Ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (618 aa)
ARN75453.12-oxoglutarate ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
ARN75563.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
ARN75568.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
ARN75569.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
gabD-2Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
ARN75632.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
ARN75633.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
ARN75650.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
ARN75651.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (713 aa)
ARN76474.1Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
ARN75719.1Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
BST96_18790Putrescine ABC transporter permease PotI; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (466 aa)
BST96_18985Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ARN76020.1Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (714 aa)
ARN76506.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
ARN76512.1Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (587 aa)
ARN76126.1Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (128 aa)
ARN76127.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ARN76143.1Acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (545 aa)
ARN76221.1hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
Your Current Organism:
Oceanicoccus sagamiensis
NCBI taxonomy Id: 716816
Other names: KCTC 23278, NBRC 107125, O. sagamiensis, gamma proteobacterium PZ-5, strain PZ-5
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