STRINGSTRING
edd edd SJ05684_b55990 SJ05684_b55990 slyX slyX SJ05684_c18920 SJ05684_c18920 SJ05684_b50180 SJ05684_b50180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
eddUnannotated protein; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (606 aa)
SJ05684_b55990Unannotated protein. (303 aa)
slyXUnannotated protein; Belongs to the SlyX family. (69 aa)
SJ05684_c18920Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (490 aa)
SJ05684_b50180Unannotated protein. (298 aa)
Your Current Organism:
Ensifer sojae
NCBI taxonomy Id: 716928
Other names: E. sojae CCBAU 05684, Ensifer sojae CCBAU 05684, Ensifer sojae str. CCBAU 05684, Ensifer sojae strain CCBAU 05684, Sinorhizobium sp. CCBAU 05684
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