18 items (Culex quinquefasciatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0WEB7_CULQU	Ubiquitin-protein ligase. (143 aa)
	B0W3T6_CULQU	Apoptosis 1 inhibitor. (409 aa)
	B0W695_CULQU	RNA-binding protein precursor, putative. (201 aa)
	B0WBD2_CULQU	Uncharacterized protein. (102 aa)
	B0WC20_CULQU	Vacuolar protein sorting. (888 aa)
	B0WGY7_CULQU	Uncharacterized protein. (735 aa)
	B0WJQ8_CULQU	Polyadenylate-binding protein. (339 aa)
	B0WMK0_CULQU	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (628 aa)
	B0WV77_CULQU	Chromatin remodelling complex ATPase chain Iswi. (730 aa)
	B0WV80_CULQU	Helicase. (105 aa)
	B0WV82_CULQU	Helicase. (1024 aa)
	B0WVS9_CULQU	Uncharacterized protein. (302 aa)
	B0WWR1_CULQU	Uncharacterized protein. (172 aa)
	B0WWR2_CULQU	Ubiquitin-protein ligase. (775 aa)
	B0WWR3_CULQU	Hyperplastic discs protein. (2898 aa)
	B0X1I1_CULQU	Uncharacterized protein. (1830 aa)
	B0X5X6_CULQU	Four way stop. (766 aa)
	B0XD25_CULQU	Ubiquitin-protein ligase. (128 aa)

Your Current Organism:

Culex quinquefasciatus

NCBI taxonomy Id: 7176
Other names: C. quinquefasciatus, Culex fatigans, Culex pipiens fatigans, Culex pipiens quinquefasciatus, southern house mosquito

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0WC20_CULQU	B0WVS9_CULQU	B0WC20	B0WVS9	Vacuolar protein sorting.	Uncharacterized protein.	0.754
B0WC20_CULQU	B0X5X6_CULQU	B0WC20	B0X5X6	Vacuolar protein sorting.	Four way stop.	0.754
B0WJQ8_CULQU	B0WMK0_CULQU	B0WJQ8	B0WMK0	Polyadenylate-binding protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.906
B0WMK0_CULQU	B0WJQ8_CULQU	B0WMK0	B0WJQ8	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	Polyadenylate-binding protein.	0.906
B0WVS9_CULQU	B0WC20_CULQU	B0WVS9	B0WC20	Uncharacterized protein.	Vacuolar protein sorting.	0.754
B0WWR1_CULQU	B0WWR3_CULQU	B0WWR1	B0WWR3	Uncharacterized protein.	Hyperplastic discs protein.	0.529
B0WWR2_CULQU	B0WWR3_CULQU	B0WWR2	B0WWR3	Ubiquitin-protein ligase.	Hyperplastic discs protein.	0.994
B0WWR3_CULQU	B0WWR1_CULQU	B0WWR3	B0WWR1	Hyperplastic discs protein.	Uncharacterized protein.	0.529
B0WWR3_CULQU	B0WWR2_CULQU	B0WWR3	B0WWR2	Hyperplastic discs protein.	Ubiquitin-protein ligase.	0.994
B0X5X6_CULQU	B0WC20_CULQU	B0X5X6	B0WC20	Four way stop.	Vacuolar protein sorting.	0.754