8 items (Culex quinquefasciatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0X8Q9_CULQU	Transcription factor p65. (528 aa)
	B0W5U2_CULQU	Embryonic polarity dorsal. (676 aa)
	B0XIZ7_CULQU	Transcription factor p65. (528 aa)
	B0XHX0_CULQU	NFAT, putative. (570 aa)
	B0WY04_CULQU	Nuclear factor NF-kappa-B p105 subunit. (997 aa)
	B0W5U4_CULQU	Embryonic polarity protein dorsal. (845 aa)
	B0WX36_CULQU	Dorsal 1-B. (452 aa)
	B0W322_CULQU	Embryonic polarity dorsal. (406 aa)

Your Current Organism:

Culex quinquefasciatus

NCBI taxonomy Id: 7176
Other names: C. quinquefasciatus, Culex fatigans, Culex pipiens fatigans, Culex pipiens quinquefasciatus, southern house mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0W322_CULQU	B0WY04_CULQU	B0W322	B0WY04	Embryonic polarity dorsal.	Nuclear factor NF-kappa-B p105 subunit.	0.626
B0W5U2_CULQU	B0WY04_CULQU	B0W5U2	B0WY04	Embryonic polarity dorsal.	Nuclear factor NF-kappa-B p105 subunit.	0.626
B0W5U4_CULQU	B0WY04_CULQU	B0W5U4	B0WY04	Embryonic polarity protein dorsal.	Nuclear factor NF-kappa-B p105 subunit.	0.635
B0W5U4_CULQU	B0X8Q9_CULQU	B0W5U4	B0X8Q9	Embryonic polarity protein dorsal.	Transcription factor p65.	0.903
B0W5U4_CULQU	B0XIZ7_CULQU	B0W5U4	B0XIZ7	Embryonic polarity protein dorsal.	Transcription factor p65.	0.903
B0WX36_CULQU	B0WY04_CULQU	B0WX36	B0WY04	Dorsal 1-B.	Nuclear factor NF-kappa-B p105 subunit.	0.626
B0WY04_CULQU	B0W322_CULQU	B0WY04	B0W322	Nuclear factor NF-kappa-B p105 subunit.	Embryonic polarity dorsal.	0.626
B0WY04_CULQU	B0W5U2_CULQU	B0WY04	B0W5U2	Nuclear factor NF-kappa-B p105 subunit.	Embryonic polarity dorsal.	0.626
B0WY04_CULQU	B0W5U4_CULQU	B0WY04	B0W5U4	Nuclear factor NF-kappa-B p105 subunit.	Embryonic polarity protein dorsal.	0.635
B0WY04_CULQU	B0WX36_CULQU	B0WY04	B0WX36	Nuclear factor NF-kappa-B p105 subunit.	Dorsal 1-B.	0.626
B0WY04_CULQU	B0X8Q9_CULQU	B0WY04	B0X8Q9	Nuclear factor NF-kappa-B p105 subunit.	Transcription factor p65.	0.626
B0WY04_CULQU	B0XIZ7_CULQU	B0WY04	B0XIZ7	Nuclear factor NF-kappa-B p105 subunit.	Transcription factor p65.	0.626
B0X8Q9_CULQU	B0W5U4_CULQU	B0X8Q9	B0W5U4	Transcription factor p65.	Embryonic polarity protein dorsal.	0.903
B0X8Q9_CULQU	B0WY04_CULQU	B0X8Q9	B0WY04	Transcription factor p65.	Nuclear factor NF-kappa-B p105 subunit.	0.626
B0X8Q9_CULQU	B0XIZ7_CULQU	B0X8Q9	B0XIZ7	Transcription factor p65.	Transcription factor p65.	0.900
B0XIZ7_CULQU	B0W5U4_CULQU	B0XIZ7	B0W5U4	Transcription factor p65.	Embryonic polarity protein dorsal.	0.903
B0XIZ7_CULQU	B0WY04_CULQU	B0XIZ7	B0WY04	Transcription factor p65.	Nuclear factor NF-kappa-B p105 subunit.	0.626
B0XIZ7_CULQU	B0X8Q9_CULQU	B0XIZ7	B0X8Q9	Transcription factor p65.	Transcription factor p65.	0.900