39 items (Culex quinquefasciatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0W1R4_CULQU	Transforming protein Ski. (321 aa)
	B0W5N8_CULQU	Anopheles stephensi ubiquitin. (128 aa)
	B0W640_CULQU	Uncharacterized protein. (1391 aa)
	B0W642_CULQU	Nuclear receptor co-repressor 1. (1138 aa)
	B0W697_CULQU	Smad4. (213 aa)
	B0W698_CULQU	Smad4. (723 aa)
	B0W701_CULQU	Ribosomal protein S27a. (156 aa)
	B0W973_CULQU	Uncharacterized protein. (1065 aa)
	B0W982_CULQU	Ubiquitin. (323 aa)
	B0WCK9_CULQU	Mothers against decapentaplegic homolog. (408 aa)
	B0WCT7_CULQU	Protein phosphatase 2C isoform beta. (369 aa)
	B0WD64_CULQU	LD06566p. (1010 aa)
	B0WD65_CULQU	E3 ubiquitin ligase. (131 aa)
	B0WDB3_CULQU	Shaggy-like protein kinase. (299 aa)
	B0WIC2_CULQU	Sodium/potassium-dependent ATPase beta-2 subunit. (317 aa)
	B0WIC3_CULQU	Sodium/potassium-dependent ATPase beta-2 subunit. (317 aa)
	B0WIC4_CULQU	Sodium/potassium-dependent ATPase beta-2 subunit. (317 aa)
	B0WIC5_CULQU	Sodium/potassium-dependent ATPase beta-2 subunit. (326 aa)
	B0WJ91_CULQU	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (489 aa)
	B0WL48_CULQU	Puff-specific protein Bx42. (558 aa)
	B0WMR5_CULQU	Homeobox domain-containing protein. (466 aa)
	B0WUX9_CULQU	Poly. (327 aa)
	B0WWB1_CULQU	Poly. (110 aa)
	B0WWB3_CULQU	Poly. (190 aa)
	B0WX43_CULQU	Sodium/potassium-dependent ATPase beta-2 subunit. (292 aa)
	B0WX77_CULQU	Poly. (315 aa)
	B0WX78_CULQU	Poly. (139 aa)
	B0WYQ2_CULQU	LD32282p. (732 aa)
	B0WYQ6_CULQU	E3 ubiquitin-protein ligase nedd-4. (760 aa)
	B0WYS5_CULQU	Poly [ADP-ribose] polymerase. (1000 aa)
	B0X0Q9_CULQU	Poly. (531 aa)
	B0X1I3_CULQU	Polyubiquitin. (533 aa)
	B0X483_CULQU	Ubiquitin specific protease 9/faf; Belongs to the peptidase C19 family. (930 aa)
	B0X676_CULQU	E3 ubiquitin-protein ligase nedd-4. (293 aa)
	B0X677_CULQU	E3 ubiquitin-protein ligase Nedd-4. (568 aa)
	B0X8H9_CULQU	Homeobox protein pknox1. (391 aa)
	B0XGF4_CULQU	Smad, putative. (207 aa)
	B0XIP0_CULQU	Histone deacetylase. (179 aa)
	B0XIP1_CULQU	Histone deacetylase. (275 aa)

Your Current Organism:

Culex quinquefasciatus

NCBI taxonomy Id: 7176
Other names: C. quinquefasciatus, Culex fatigans, Culex pipiens fatigans, Culex pipiens quinquefasciatus, southern house mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0W1R4_CULQU	B0W640_CULQU	B0W1R4	B0W640	Transforming protein Ski.	Uncharacterized protein.	0.766
B0W1R4_CULQU	B0W642_CULQU	B0W1R4	B0W642	Transforming protein Ski.	Nuclear receptor co-repressor 1.	0.766
B0W1R4_CULQU	B0W697_CULQU	B0W1R4	B0W697	Transforming protein Ski.	Smad4.	0.963
B0W1R4_CULQU	B0W698_CULQU	B0W1R4	B0W698	Transforming protein Ski.	Smad4.	0.963
B0W1R4_CULQU	B0W701_CULQU	B0W1R4	B0W701	Transforming protein Ski.	Ribosomal protein S27a.	0.644
B0W1R4_CULQU	B0W973_CULQU	B0W1R4	B0W973	Transforming protein Ski.	Uncharacterized protein.	0.475
B0W1R4_CULQU	B0W982_CULQU	B0W1R4	B0W982	Transforming protein Ski.	Ubiquitin.	0.475
B0W1R4_CULQU	B0WCK9_CULQU	B0W1R4	B0WCK9	Transforming protein Ski.	Mothers against decapentaplegic homolog.	0.858
B0W1R4_CULQU	B0X1I3_CULQU	B0W1R4	B0X1I3	Transforming protein Ski.	Polyubiquitin.	0.475
B0W1R4_CULQU	B0XGF4_CULQU	B0W1R4	B0XGF4	Transforming protein Ski.	Smad, putative.	0.858
B0W5N8_CULQU	B0W640_CULQU	B0W5N8	B0W640	Anopheles stephensi ubiquitin.	Uncharacterized protein.	0.644
B0W5N8_CULQU	B0W642_CULQU	B0W5N8	B0W642	Anopheles stephensi ubiquitin.	Nuclear receptor co-repressor 1.	0.644
B0W5N8_CULQU	B0W701_CULQU	B0W5N8	B0W701	Anopheles stephensi ubiquitin.	Ribosomal protein S27a.	0.999
B0W5N8_CULQU	B0W973_CULQU	B0W5N8	B0W973	Anopheles stephensi ubiquitin.	Uncharacterized protein.	0.963
B0W5N8_CULQU	B0W982_CULQU	B0W5N8	B0W982	Anopheles stephensi ubiquitin.	Ubiquitin.	0.946
B0W5N8_CULQU	B0WD64_CULQU	B0W5N8	B0WD64	Anopheles stephensi ubiquitin.	LD06566p.	0.862
B0W5N8_CULQU	B0WD65_CULQU	B0W5N8	B0WD65	Anopheles stephensi ubiquitin.	E3 ubiquitin ligase.	0.862
B0W5N8_CULQU	B0WJ91_CULQU	B0W5N8	B0WJ91	Anopheles stephensi ubiquitin.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.519
B0W5N8_CULQU	B0WYQ2_CULQU	B0W5N8	B0WYQ2	Anopheles stephensi ubiquitin.	LD32282p.	0.751
B0W5N8_CULQU	B0WYQ6_CULQU	B0W5N8	B0WYQ6	Anopheles stephensi ubiquitin.	E3 ubiquitin-protein ligase nedd-4.	0.751