15 items (Culex quinquefasciatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0W282_CULQU	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (536 aa)
	B0W419_CULQU	Syntenin-1. (328 aa)
	B0W4Z9_CULQU	Pak-interacting exchange factor, beta-pix/cool-1. (656 aa)
	B0W601_CULQU	Uncharacterized protein. (575 aa)
	B0W602_CULQU	Uncharacterized protein. (747 aa)
	B0W702_CULQU	Cytoplasmic protein NCK1. (412 aa)
	B0WD28_CULQU	ARF GTPase-activating protein GIT2. (278 aa)
	B0WD29_CULQU	Uncharacterized protein. (701 aa)
	B0WFH2_CULQU	Non-specific serine/threonine protein kinase. (641 aa)
	B0WKV3_CULQU	CRIB domain-containing protein. (97 aa)
	B0WKZ9_CULQU	Tyrosine-protein kinase src64b; Belongs to the protein kinase superfamily. Tyr protein kinase family. (531 aa)
	B0X4G2_CULQU	Fibronectin type-III domain-containing protein 3a. (1185 aa)
	B0X4G3_CULQU	Factor for adipocyte differentiation. (180 aa)
	B0X7S3_CULQU	CRIB domain-containing protein. (96 aa)
	B0X7T1_CULQU	Eph receptor tyrosine kinase. (730 aa)

Your Current Organism:

Culex quinquefasciatus

NCBI taxonomy Id: 7176
Other names: C. quinquefasciatus, Culex fatigans, Culex pipiens fatigans, Culex pipiens quinquefasciatus, southern house mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0W282_CULQU	B0W419_CULQU	B0W282	B0W419	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Syntenin-1.	0.649
B0W282_CULQU	B0W4Z9_CULQU	B0W282	B0W4Z9	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Pak-interacting exchange factor, beta-pix/cool-1.	0.683
B0W282_CULQU	B0W702_CULQU	B0W282	B0W702	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Cytoplasmic protein NCK1.	0.832
B0W282_CULQU	B0WD28_CULQU	B0W282	B0WD28	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	ARF GTPase-activating protein GIT2.	0.669
B0W282_CULQU	B0WD29_CULQU	B0W282	B0WD29	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.669
B0W282_CULQU	B0WFH2_CULQU	B0W282	B0WFH2	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Non-specific serine/threonine protein kinase.	0.515
B0W282_CULQU	B0WKV3_CULQU	B0W282	B0WKV3	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	CRIB domain-containing protein.	0.515
B0W282_CULQU	B0WKZ9_CULQU	B0W282	B0WKZ9	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Tyrosine-protein kinase src64b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.591
B0W282_CULQU	B0X7S3_CULQU	B0W282	B0X7S3	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	CRIB domain-containing protein.	0.515
B0W282_CULQU	B0X7T1_CULQU	B0W282	B0X7T1	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Eph receptor tyrosine kinase.	0.986
B0W419_CULQU	B0W282_CULQU	B0W419	B0W282	Syntenin-1.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.649
B0W419_CULQU	B0X7T1_CULQU	B0W419	B0X7T1	Syntenin-1.	Eph receptor tyrosine kinase.	0.480
B0W4Z9_CULQU	B0W282_CULQU	B0W4Z9	B0W282	Pak-interacting exchange factor, beta-pix/cool-1.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.683
B0W4Z9_CULQU	B0W702_CULQU	B0W4Z9	B0W702	Pak-interacting exchange factor, beta-pix/cool-1.	Cytoplasmic protein NCK1.	0.856
B0W4Z9_CULQU	B0WD28_CULQU	B0W4Z9	B0WD28	Pak-interacting exchange factor, beta-pix/cool-1.	ARF GTPase-activating protein GIT2.	0.949
B0W4Z9_CULQU	B0WD29_CULQU	B0W4Z9	B0WD29	Pak-interacting exchange factor, beta-pix/cool-1.	Uncharacterized protein.	0.949
B0W4Z9_CULQU	B0WFH2_CULQU	B0W4Z9	B0WFH2	Pak-interacting exchange factor, beta-pix/cool-1.	Non-specific serine/threonine protein kinase.	0.889
B0W4Z9_CULQU	B0WKV3_CULQU	B0W4Z9	B0WKV3	Pak-interacting exchange factor, beta-pix/cool-1.	CRIB domain-containing protein.	0.891
B0W4Z9_CULQU	B0WKZ9_CULQU	B0W4Z9	B0WKZ9	Pak-interacting exchange factor, beta-pix/cool-1.	Tyrosine-protein kinase src64b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.573
B0W4Z9_CULQU	B0X7S3_CULQU	B0W4Z9	B0X7S3	Pak-interacting exchange factor, beta-pix/cool-1.	CRIB domain-containing protein.	0.891