5 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2MR50_BAUPA	Uncharacterized protein. (1189 aa)
	M2LQE5_BAUPA	Uncharacterized protein. (960 aa)
	M2N1S0_BAUPA	Uncharacterized protein. (1028 aa)
	M2N5L0_BAUPA	Uncharacterized protein. (519 aa)
	M2NPW3_BAUPA	MAP kinase kinase kinase. (1396 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LQE5_BAUPA	M2MR50_BAUPA	M2LQE5	M2MR50	Uncharacterized protein.	Uncharacterized protein.	0.566
M2LQE5_BAUPA	M2N1S0_BAUPA	M2LQE5	M2N1S0	Uncharacterized protein.	Uncharacterized protein.	0.993
M2MR50_BAUPA	M2LQE5_BAUPA	M2MR50	M2LQE5	Uncharacterized protein.	Uncharacterized protein.	0.566
M2MR50_BAUPA	M2N1S0_BAUPA	M2MR50	M2N1S0	Uncharacterized protein.	Uncharacterized protein.	0.485
M2MR50_BAUPA	M2NPW3_BAUPA	M2MR50	M2NPW3	Uncharacterized protein.	MAP kinase kinase kinase.	0.649
M2N1S0_BAUPA	M2LQE5_BAUPA	M2N1S0	M2LQE5	Uncharacterized protein.	Uncharacterized protein.	0.993
M2N1S0_BAUPA	M2MR50_BAUPA	M2N1S0	M2MR50	Uncharacterized protein.	Uncharacterized protein.	0.485
M2N1S0_BAUPA	M2NPW3_BAUPA	M2N1S0	M2NPW3	Uncharacterized protein.	MAP kinase kinase kinase.	0.431
M2NPW3_BAUPA	M2MR50_BAUPA	M2NPW3	M2MR50	MAP kinase kinase kinase.	Uncharacterized protein.	0.649
M2NPW3_BAUPA	M2N1S0_BAUPA	M2NPW3	M2N1S0	MAP kinase kinase kinase.	Uncharacterized protein.	0.431