24 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2LEB8_BAUPA	CASP_C domain-containing protein. (731 aa)
	M2NKS4_BAUPA	Uncharacterized protein. (827 aa)
	M2NJN0_BAUPA	Uncharacterized protein. (302 aa)
	M2NHN6_BAUPA	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (927 aa)
	M2NB58_BAUPA	Cog4 domain-containing protein. (787 aa)
	M2NAX7_BAUPA	Uncharacterized protein. (1449 aa)
	M2NAU2_BAUPA	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (696 aa)
	M2NA74_BAUPA	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1224 aa)
	M2N7I7_BAUPA	Uncharacterized protein. (450 aa)
	M2N2K0_BAUPA	t-SNARE coiled-coil homology domain-containing protein. (347 aa)
	M2MY54_BAUPA	Uncharacterized protein. (206 aa)
	M2MVV5_BAUPA	Uncharacterized protein. (489 aa)
	M2MT51_BAUPA	Uncharacterized protein. (409 aa)
	M2MS80_BAUPA	Uncharacterized protein. (97 aa)
	M2MIL6_BAUPA	Uncharacterized protein. (728 aa)
	M2MHU2_BAUPA	Uncharacterized protein. (1150 aa)
	M2MGS9_BAUPA	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (200 aa)
	M2MEB2_BAUPA	t-SNARE coiled-coil homology domain-containing protein. (224 aa)
	M2MA40_BAUPA	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (871 aa)
	M2M1N3_BAUPA	Uncharacterized protein. (508 aa)
	M2LYC7_BAUPA	Arf-GAP domain-containing protein. (578 aa)
	M2LVJ4_BAUPA	Trafficking protein particle complex subunit BET3. (199 aa)
	M2LP79_BAUPA	Uncharacterized protein. (781 aa)
	M2LML9_BAUPA	Uncharacterized protein. (812 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LML9_BAUPA	M2LP79_BAUPA	M2LML9	M2LP79	Uncharacterized protein.	Uncharacterized protein.	0.619
M2LML9_BAUPA	M2MA40_BAUPA	M2LML9	M2MA40	Uncharacterized protein.	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.813
M2LML9_BAUPA	M2MEB2_BAUPA	M2LML9	M2MEB2	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.879
M2LML9_BAUPA	M2MGS9_BAUPA	M2LML9	M2MGS9	Uncharacterized protein.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.648
M2LML9_BAUPA	M2MS80_BAUPA	M2LML9	M2MS80	Uncharacterized protein.	Uncharacterized protein.	0.755
M2LML9_BAUPA	M2MT51_BAUPA	M2LML9	M2MT51	Uncharacterized protein.	Uncharacterized protein.	0.616
M2LML9_BAUPA	M2MVV5_BAUPA	M2LML9	M2MVV5	Uncharacterized protein.	Uncharacterized protein.	0.640
M2LML9_BAUPA	M2MY54_BAUPA	M2LML9	M2MY54	Uncharacterized protein.	Uncharacterized protein.	0.707
M2LML9_BAUPA	M2N2K0_BAUPA	M2LML9	M2N2K0	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.866
M2LML9_BAUPA	M2NA74_BAUPA	M2LML9	M2NA74	Uncharacterized protein.	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	0.752
M2LML9_BAUPA	M2NAU2_BAUPA	M2LML9	M2NAU2	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.638
M2LML9_BAUPA	M2NB58_BAUPA	M2LML9	M2NB58	Uncharacterized protein.	Cog4 domain-containing protein.	0.619
M2LML9_BAUPA	M2NHN6_BAUPA	M2LML9	M2NHN6	Uncharacterized protein.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.717
M2LML9_BAUPA	M2NJN0_BAUPA	M2LML9	M2NJN0	Uncharacterized protein.	Uncharacterized protein.	0.690
M2LML9_BAUPA	M2NKS4_BAUPA	M2LML9	M2NKS4	Uncharacterized protein.	Uncharacterized protein.	0.634
M2LP79_BAUPA	M2LML9_BAUPA	M2LP79	M2LML9	Uncharacterized protein.	Uncharacterized protein.	0.619
M2LP79_BAUPA	M2MA40_BAUPA	M2LP79	M2MA40	Uncharacterized protein.	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.461
M2LP79_BAUPA	M2MEB2_BAUPA	M2LP79	M2MEB2	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.732
M2LP79_BAUPA	M2MS80_BAUPA	M2LP79	M2MS80	Uncharacterized protein.	Uncharacterized protein.	0.642
M2LP79_BAUPA	M2MT51_BAUPA	M2LP79	M2MT51	Uncharacterized protein.	Uncharacterized protein.	0.937