11 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2NQI6_BAUPA	Uncharacterized protein. (215 aa)
	M2LLF0_BAUPA	WD_REPEATS_REGION domain-containing protein. (1288 aa)
	M2MHH8_BAUPA	Uncharacterized protein. (1045 aa)
	M2MYW0_BAUPA	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1920 aa)
	M2MZ56_BAUPA	Uncharacterized protein. (455 aa)
	M2N0K9_BAUPA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (781 aa)
	M2N1D8_BAUPA	Uncharacterized protein. (218 aa)
	M2N3G2_BAUPA	Arf-GAP domain-containing protein. (491 aa)
	M2N9N8_BAUPA	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (318 aa)
	M2N9T3_BAUPA	Uncharacterized protein. (356 aa)
	M2NHH7_BAUPA	Uncharacterized protein. (214 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LLF0_BAUPA	M2MHH8_BAUPA	M2LLF0	M2MHH8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.990
M2LLF0_BAUPA	M2MYW0_BAUPA	M2LLF0	M2MYW0	WD_REPEATS_REGION domain-containing protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.913
M2LLF0_BAUPA	M2N0K9_BAUPA	M2LLF0	M2N0K9	WD_REPEATS_REGION domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
M2LLF0_BAUPA	M2N9N8_BAUPA	M2LLF0	M2N9N8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.999
M2MHH8_BAUPA	M2LLF0_BAUPA	M2MHH8	M2LLF0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.990
M2MHH8_BAUPA	M2MYW0_BAUPA	M2MHH8	M2MYW0	Uncharacterized protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.975
M2MHH8_BAUPA	M2N0K9_BAUPA	M2MHH8	M2N0K9	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
M2MHH8_BAUPA	M2N9N8_BAUPA	M2MHH8	M2N9N8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.997
M2MYW0_BAUPA	M2LLF0_BAUPA	M2MYW0	M2LLF0	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	WD_REPEATS_REGION domain-containing protein.	0.913
M2MYW0_BAUPA	M2MHH8_BAUPA	M2MYW0	M2MHH8	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	Uncharacterized protein.	0.975
M2MYW0_BAUPA	M2N0K9_BAUPA	M2MYW0	M2N0K9	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.957
M2MYW0_BAUPA	M2N9N8_BAUPA	M2MYW0	M2N9N8	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.996
M2MZ56_BAUPA	M2N1D8_BAUPA	M2MZ56	M2N1D8	Uncharacterized protein.	Uncharacterized protein.	0.989
M2MZ56_BAUPA	M2NHH7_BAUPA	M2MZ56	M2NHH7	Uncharacterized protein.	Uncharacterized protein.	0.827
M2MZ56_BAUPA	M2NQI6_BAUPA	M2MZ56	M2NQI6	Uncharacterized protein.	Uncharacterized protein.	0.971
M2N0K9_BAUPA	M2LLF0_BAUPA	M2N0K9	M2LLF0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.999
M2N0K9_BAUPA	M2MHH8_BAUPA	M2N0K9	M2MHH8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.999
M2N0K9_BAUPA	M2MYW0_BAUPA	M2N0K9	M2MYW0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.957
M2N0K9_BAUPA	M2N9N8_BAUPA	M2N0K9	M2N9N8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.998
M2N1D8_BAUPA	M2MZ56_BAUPA	M2N1D8	M2MZ56	Uncharacterized protein.	Uncharacterized protein.	0.989