18 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2NIG8_BAUPA	TYR_PHOSPHATASE_2 domain-containing protein. (673 aa)
	M2NKQ1_BAUPA	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1051 aa)
	M2LKC9_BAUPA	Spc7 domain-containing protein. (1281 aa)
	M2N1E6_BAUPA	Uncharacterized protein. (340 aa)
	M2LN54_BAUPA	Uncharacterized protein. (707 aa)
	M2LNJ0_BAUPA	Uncharacterized protein. (1229 aa)
	M2LQT3_BAUPA	Uncharacterized protein. (660 aa)
	M2M731_BAUPA	HORMA domain-containing protein. (230 aa)
	M2MD54_BAUPA	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (306 aa)
	M2MEV3_BAUPA	Serine/threonine-protein kinase. (956 aa)
	M2MPK6_BAUPA	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (489 aa)
	M2MSQ1_BAUPA	BED-type domain-containing protein. (594 aa)
	M2MXZ3_BAUPA	Uncharacterized protein. (840 aa)
	M2MZ83_BAUPA	WD_REPEATS_REGION domain-containing protein. (403 aa)
	M2N946_BAUPA	Uncharacterized protein. (629 aa)
	M2N996_BAUPA	Uncharacterized protein. (962 aa)
	M2NAI9_BAUPA	Uncharacterized protein. (471 aa)
	M2NEX5_BAUPA	Uncharacterized protein. (304 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LKC9_BAUPA	M2LNJ0_BAUPA	M2LKC9	M2LNJ0	Spc7 domain-containing protein.	Uncharacterized protein.	0.912
M2LKC9_BAUPA	M2M731_BAUPA	M2LKC9	M2M731	Spc7 domain-containing protein.	HORMA domain-containing protein.	0.513
M2LKC9_BAUPA	M2MD54_BAUPA	M2LKC9	M2MD54	Spc7 domain-containing protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.501
M2LKC9_BAUPA	M2MZ83_BAUPA	M2LKC9	M2MZ83	Spc7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.953
M2LN54_BAUPA	M2LNJ0_BAUPA	M2LN54	M2LNJ0	Uncharacterized protein.	Uncharacterized protein.	0.978
M2LN54_BAUPA	M2LQT3_BAUPA	M2LN54	M2LQT3	Uncharacterized protein.	Uncharacterized protein.	0.567
M2LN54_BAUPA	M2M731_BAUPA	M2LN54	M2M731	Uncharacterized protein.	HORMA domain-containing protein.	0.999
M2LN54_BAUPA	M2MEV3_BAUPA	M2LN54	M2MEV3	Uncharacterized protein.	Serine/threonine-protein kinase.	0.653
M2LN54_BAUPA	M2MPK6_BAUPA	M2LN54	M2MPK6	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.906
M2LN54_BAUPA	M2MXZ3_BAUPA	M2LN54	M2MXZ3	Uncharacterized protein.	Uncharacterized protein.	0.599
M2LN54_BAUPA	M2MZ83_BAUPA	M2LN54	M2MZ83	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.895
M2LNJ0_BAUPA	M2LKC9_BAUPA	M2LNJ0	M2LKC9	Uncharacterized protein.	Spc7 domain-containing protein.	0.912
M2LNJ0_BAUPA	M2LN54_BAUPA	M2LNJ0	M2LN54	Uncharacterized protein.	Uncharacterized protein.	0.978
M2LNJ0_BAUPA	M2M731_BAUPA	M2LNJ0	M2M731	Uncharacterized protein.	HORMA domain-containing protein.	0.999
M2LNJ0_BAUPA	M2MD54_BAUPA	M2LNJ0	M2MD54	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.483
M2LNJ0_BAUPA	M2MEV3_BAUPA	M2LNJ0	M2MEV3	Uncharacterized protein.	Serine/threonine-protein kinase.	0.965
M2LNJ0_BAUPA	M2MXZ3_BAUPA	M2LNJ0	M2MXZ3	Uncharacterized protein.	Uncharacterized protein.	0.817
M2LNJ0_BAUPA	M2MZ83_BAUPA	M2LNJ0	M2MZ83	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
M2LNJ0_BAUPA	M2NIG8_BAUPA	M2LNJ0	M2NIG8	Uncharacterized protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.510
M2LNJ0_BAUPA	M2NKQ1_BAUPA	M2LNJ0	M2NKQ1	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.835