38 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2M715_BAUPA	Uncharacterized protein. (1056 aa)
	M2LBF9_BAUPA	WD_REPEATS_REGION domain-containing protein. (352 aa)
	M2LCH7_BAUPA	Uncharacterized protein. (386 aa)
	M2LCN9_BAUPA	CPSF_A domain-containing protein. (1148 aa)
	M2LH26_BAUPA	Uncharacterized protein. (529 aa)
	M2LKJ4_BAUPA	Uncharacterized protein. (171 aa)
	M2LNC3_BAUPA	RNA_pol_Rpb5_N domain-containing protein. (171 aa)
	M2LWU2_BAUPA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (137 aa)
	M2M1S3_BAUPA	BZIP domain-containing protein. (274 aa)
	M2M8J7_BAUPA	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (489 aa)
	M2MHT3_BAUPA	PCI domain-containing protein. (481 aa)
	M2MMX8_BAUPA	PCI domain-containing protein. (497 aa)
	M2MNE6_BAUPA	Uncharacterized protein. (1182 aa)
	M2MPQ9_BAUPA	MPN domain-containing protein. (414 aa)
	M2MQ59_BAUPA	RPOL4c domain-containing protein. (161 aa)
	M2MTP9_BAUPA	RPOLD domain-containing protein. (389 aa)
	M2MU67_BAUPA	RRM domain-containing protein. (145 aa)
	M2MVK6_BAUPA	CIA30 domain-containing protein. (228 aa)
	M2MWT4_BAUPA	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (405 aa)
	M2MYM2_BAUPA	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (459 aa)
	M2MYP9_BAUPA	RNA_pol_L_2 domain-containing protein. (122 aa)
	M2MZ48_BAUPA	RING-type domain-containing protein. (121 aa)
	M2MZH1_BAUPA	CYCLIN domain-containing protein; Belongs to the cyclin family. (392 aa)
	M2N181_BAUPA	Uncharacterized protein. (83 aa)
	M2N2B1_BAUPA	S1 motif domain-containing protein. (171 aa)
	M2N2F6_BAUPA	PCI domain-containing protein. (409 aa)
	M2N508_BAUPA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1789 aa)
	M2N511_BAUPA	PCI domain-containing protein. (232 aa)
	M2N525_BAUPA	Uncharacterized protein. (852 aa)
	M2N9G1_BAUPA	Helicase ATP-binding domain-containing protein. (803 aa)
	M2N9Q6_BAUPA	Ubiquitin-like domain-containing protein. (154 aa)
	M2N9W7_BAUPA	Uncharacterized protein. (486 aa)
	M2NGD5_BAUPA	BSD domain-containing protein. (644 aa)
	M2NGK9_BAUPA	MPN domain-containing protein. (349 aa)
	M2NGN8_BAUPA	CULLIN_2 domain-containing protein; Belongs to the cullin family. (907 aa)
	M2NI14_BAUPA	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1254 aa)
	M2NJR4_BAUPA	RING-type domain-containing protein. (307 aa)
	M2NK02_BAUPA	U1-type domain-containing protein. (73 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LBF9_BAUPA	M2LCH7_BAUPA	M2LBF9	M2LCH7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.643
M2LBF9_BAUPA	M2LCN9_BAUPA	M2LBF9	M2LCN9	WD_REPEATS_REGION domain-containing protein.	CPSF_A domain-containing protein.	0.997
M2LBF9_BAUPA	M2LH26_BAUPA	M2LBF9	M2LH26	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.775
M2LBF9_BAUPA	M2LKJ4_BAUPA	M2LBF9	M2LKJ4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.847
M2LBF9_BAUPA	M2LNC3_BAUPA	M2LBF9	M2LNC3	WD_REPEATS_REGION domain-containing protein.	RNA_pol_Rpb5_N domain-containing protein.	0.849
M2LBF9_BAUPA	M2LWU2_BAUPA	M2LBF9	M2LWU2	WD_REPEATS_REGION domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.862
M2LBF9_BAUPA	M2M1S3_BAUPA	M2LBF9	M2M1S3	WD_REPEATS_REGION domain-containing protein.	BZIP domain-containing protein.	0.471
M2LBF9_BAUPA	M2M8J7_BAUPA	M2LBF9	M2M8J7	WD_REPEATS_REGION domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.628
M2LBF9_BAUPA	M2MHT3_BAUPA	M2LBF9	M2MHT3	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.673
M2LBF9_BAUPA	M2MMX8_BAUPA	M2LBF9	M2MMX8	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.666
M2LBF9_BAUPA	M2MNE6_BAUPA	M2LBF9	M2MNE6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.983
M2LBF9_BAUPA	M2MPQ9_BAUPA	M2LBF9	M2MPQ9	WD_REPEATS_REGION domain-containing protein.	MPN domain-containing protein.	0.687
M2LBF9_BAUPA	M2MQ59_BAUPA	M2LBF9	M2MQ59	WD_REPEATS_REGION domain-containing protein.	RPOL4c domain-containing protein.	0.849
M2LBF9_BAUPA	M2MTP9_BAUPA	M2LBF9	M2MTP9	WD_REPEATS_REGION domain-containing protein.	RPOLD domain-containing protein.	0.848
M2LBF9_BAUPA	M2MVK6_BAUPA	M2LBF9	M2MVK6	WD_REPEATS_REGION domain-containing protein.	CIA30 domain-containing protein.	0.471
M2LBF9_BAUPA	M2MWT4_BAUPA	M2LBF9	M2MWT4	WD_REPEATS_REGION domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.644
M2LBF9_BAUPA	M2MYM2_BAUPA	M2LBF9	M2MYM2	WD_REPEATS_REGION domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.747
M2LBF9_BAUPA	M2MYP9_BAUPA	M2LBF9	M2MYP9	WD_REPEATS_REGION domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.842
M2LBF9_BAUPA	M2MZ48_BAUPA	M2LBF9	M2MZ48	WD_REPEATS_REGION domain-containing protein.	RING-type domain-containing protein.	0.915
M2LBF9_BAUPA	M2MZH1_BAUPA	M2LBF9	M2MZH1	WD_REPEATS_REGION domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.672