33 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2LE79_BAUPA	Uncharacterized protein; Belongs to the ClpA/ClpB family. (937 aa)
	M2NQ09_BAUPA	Uncharacterized protein; Belongs to the ClpA/ClpB family. (783 aa)
	M2NMM4_BAUPA	Protein kinase domain-containing protein. (823 aa)
	M2N3N2_BAUPA	Uncharacterized protein. (1049 aa)
	M2N3G1_BAUPA	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (702 aa)
	M2N2A6_BAUPA	ENTH domain-containing protein. (583 aa)
	M2LBN1_BAUPA	C2 domain-containing protein. (513 aa)
	M2N105_BAUPA	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (935 aa)
	M2MZI8_BAUPA	Rad60-SLD_2 domain-containing protein. (225 aa)
	M2MZ61_BAUPA	Uncharacterized protein; Belongs to the synaptobrevin family. (247 aa)
	M2MW91_BAUPA	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	M2MVK6_BAUPA	CIA30 domain-containing protein. (228 aa)
	M2MUF6_BAUPA	Uncharacterized protein. (349 aa)
	M2MS67_BAUPA	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (768 aa)
	M2MQS8_BAUPA	MFS domain-containing protein. (510 aa)
	M2MQL5_BAUPA	SH3 domain-containing protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. (329 aa)
	M2MPQ9_BAUPA	MPN domain-containing protein. (414 aa)
	M2MMX8_BAUPA	PCI domain-containing protein. (497 aa)
	M2ML58_BAUPA	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (424 aa)
	M2MDD2_BAUPA	V-SNARE coiled-coil homology domain-containing protein. (106 aa)
	M2M4Z6_BAUPA	DUF1681 domain-containing protein. (259 aa)
	M2NK44_BAUPA	ENTH domain-containing protein. (531 aa)
	M2NAR6_BAUPA	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (746 aa)
	M2N526_BAUPA	Uncharacterized protein. (428 aa)
	M2N511_BAUPA	PCI domain-containing protein. (232 aa)
	M2N9W7_BAUPA	Uncharacterized protein. (486 aa)
	M2N9Q6_BAUPA	Ubiquitin-like domain-containing protein. (154 aa)
	M2N7U2_BAUPA	ENTH domain-containing protein. (641 aa)
	M2M4S4_BAUPA	MFS domain-containing protein. (497 aa)
	M2M1S3_BAUPA	BZIP domain-containing protein. (274 aa)
	M2M0Y9_BAUPA	Uncharacterized protein. (677 aa)
	M2M0B9_BAUPA	Uncharacterized protein. (340 aa)
	M2LP01_BAUPA	Ubiquitin-like domain-containing protein. (79 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LBN1_BAUPA	M2MDD2_BAUPA	M2LBN1	M2MDD2	C2 domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.469
M2LBN1_BAUPA	M2N7U2_BAUPA	M2LBN1	M2N7U2	C2 domain-containing protein.	ENTH domain-containing protein.	0.679
M2LE79_BAUPA	M2NQ09_BAUPA	M2LE79	M2NQ09	Uncharacterized protein; Belongs to the ClpA/ClpB family.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.863
M2LP01_BAUPA	M2M1S3_BAUPA	M2LP01	M2M1S3	Ubiquitin-like domain-containing protein.	BZIP domain-containing protein.	0.827
M2LP01_BAUPA	M2ML58_BAUPA	M2LP01	M2ML58	Ubiquitin-like domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.632
M2LP01_BAUPA	M2MMX8_BAUPA	M2LP01	M2MMX8	Ubiquitin-like domain-containing protein.	PCI domain-containing protein.	0.871
M2LP01_BAUPA	M2MPQ9_BAUPA	M2LP01	M2MPQ9	Ubiquitin-like domain-containing protein.	MPN domain-containing protein.	0.978
M2LP01_BAUPA	M2MS67_BAUPA	M2LP01	M2MS67	Ubiquitin-like domain-containing protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.440
M2LP01_BAUPA	M2MUF6_BAUPA	M2LP01	M2MUF6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.440
M2LP01_BAUPA	M2MVK6_BAUPA	M2LP01	M2MVK6	Ubiquitin-like domain-containing protein.	CIA30 domain-containing protein.	0.827
M2LP01_BAUPA	M2MW91_BAUPA	M2LP01	M2MW91	Ubiquitin-like domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.437
M2LP01_BAUPA	M2N511_BAUPA	M2LP01	M2N511	Ubiquitin-like domain-containing protein.	PCI domain-containing protein.	0.897
M2LP01_BAUPA	M2N9Q6_BAUPA	M2LP01	M2N9Q6	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.831
M2LP01_BAUPA	M2N9W7_BAUPA	M2LP01	M2N9W7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.901
M2M0B9_BAUPA	M2MDD2_BAUPA	M2M0B9	M2MDD2	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.624
M2M0B9_BAUPA	M2NMM4_BAUPA	M2M0B9	M2NMM4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.433
M2M1S3_BAUPA	M2LP01_BAUPA	M2M1S3	M2LP01	BZIP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.827
M2M1S3_BAUPA	M2ML58_BAUPA	M2M1S3	M2ML58	BZIP domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.586
M2M1S3_BAUPA	M2MMX8_BAUPA	M2M1S3	M2MMX8	BZIP domain-containing protein.	PCI domain-containing protein.	0.625
M2M1S3_BAUPA	M2MPQ9_BAUPA	M2M1S3	M2MPQ9	BZIP domain-containing protein.	MPN domain-containing protein.	0.581