37 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2MI03_BAUPA	Ysc84 domain-containing protein. (314 aa)
	M2MHU2_BAUPA	Uncharacterized protein. (1150 aa)
	M2M951_BAUPA	Uncharacterized protein. (672 aa)
	M2LZC7_BAUPA	Uncharacterized protein. (451 aa)
	M2LVJ4_BAUPA	Trafficking protein particle complex subunit BET3. (199 aa)
	M2LT53_BAUPA	Uncharacterized protein. (249 aa)
	M2LSX1_BAUPA	Uncharacterized protein. (321 aa)
	M2LC79_BAUPA	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1569 aa)
	M2LD67_BAUPA	UDENN domain-containing protein. (963 aa)
	M2LHY8_BAUPA	Uncharacterized protein. (176 aa)
	M2LGF9_BAUPA	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (146 aa)
	M2NNA8_BAUPA	RIC1 domain-containing protein. (1058 aa)
	M2LG98_BAUPA	Uncharacterized protein. (431 aa)
	M2LFW3_BAUPA	Uncharacterized protein. (208 aa)
	M2NKP2_BAUPA	SH3 domain-containing protein. (359 aa)
	M2NHP2_BAUPA	Sec2p domain-containing protein. (486 aa)
	M2NH76_BAUPA	Sec2p domain-containing protein. (243 aa)
	M2NFD8_BAUPA	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (229 aa)
	M2NF12_BAUPA	Uncharacterized protein. (178 aa)
	M2NE69_BAUPA	Uncharacterized protein. (858 aa)
	M2NAX7_BAUPA	Uncharacterized protein. (1449 aa)
	M2N942_BAUPA	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1298 aa)
	M2N7W1_BAUPA	Uncharacterized protein. (232 aa)
	M2N756_BAUPA	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (505 aa)
	M2N4A3_BAUPA	Uncharacterized protein. (313 aa)
	M2N3L2_BAUPA	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (444 aa)
	M2N1R0_BAUPA	VPS9 domain-containing protein. (755 aa)
	M2MZZ9_BAUPA	Uncharacterized protein. (821 aa)
	M2MZV9_BAUPA	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (161 aa)
	M2MY54_BAUPA	Uncharacterized protein. (206 aa)
	M2MW63_BAUPA	Uncharacterized protein. (445 aa)
	M2MVS4_BAUPA	Uncharacterized protein. (1224 aa)
	M2MUT9_BAUPA	Uncharacterized protein. (876 aa)
	M2MUP3_BAUPA	Uncharacterized protein. (96 aa)
	M2MQM8_BAUPA	Ysc84 domain-containing protein. (364 aa)
	M2MLS9_BAUPA	Uncharacterized protein. (1118 aa)
	M2MJ94_BAUPA	Uncharacterized protein. (201 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LC79_BAUPA	M2NNA8_BAUPA	M2LC79	M2NNA8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	RIC1 domain-containing protein.	0.532
M2LD67_BAUPA	M2LFW3_BAUPA	M2LD67	M2LFW3	UDENN domain-containing protein.	Uncharacterized protein.	0.642
M2LD67_BAUPA	M2M951_BAUPA	M2LD67	M2M951	UDENN domain-containing protein.	Uncharacterized protein.	0.642
M2LFW3_BAUPA	M2LD67_BAUPA	M2LFW3	M2LD67	Uncharacterized protein.	UDENN domain-containing protein.	0.642
M2LFW3_BAUPA	M2LZC7_BAUPA	M2LFW3	M2LZC7	Uncharacterized protein.	Uncharacterized protein.	0.772
M2LFW3_BAUPA	M2MJ94_BAUPA	M2LFW3	M2MJ94	Uncharacterized protein.	Uncharacterized protein.	0.834
M2LFW3_BAUPA	M2MY54_BAUPA	M2LFW3	M2MY54	Uncharacterized protein.	Uncharacterized protein.	0.600
M2LFW3_BAUPA	M2N3L2_BAUPA	M2LFW3	M2N3L2	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.930
M2LFW3_BAUPA	M2N4A3_BAUPA	M2LFW3	M2N4A3	Uncharacterized protein.	Uncharacterized protein.	0.718
M2LFW3_BAUPA	M2N756_BAUPA	M2LFW3	M2N756	Uncharacterized protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.847
M2LFW3_BAUPA	M2NE69_BAUPA	M2LFW3	M2NE69	Uncharacterized protein.	Uncharacterized protein.	0.735
M2LFW3_BAUPA	M2NH76_BAUPA	M2LFW3	M2NH76	Uncharacterized protein.	Sec2p domain-containing protein.	0.836
M2LFW3_BAUPA	M2NHP2_BAUPA	M2LFW3	M2NHP2	Uncharacterized protein.	Sec2p domain-containing protein.	0.932
M2LG98_BAUPA	M2LGF9_BAUPA	M2LG98	M2LGF9	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.979
M2LG98_BAUPA	M2LHY8_BAUPA	M2LG98	M2LHY8	Uncharacterized protein.	Uncharacterized protein.	0.973
M2LG98_BAUPA	M2LSX1_BAUPA	M2LG98	M2LSX1	Uncharacterized protein.	Uncharacterized protein.	0.985
M2LG98_BAUPA	M2LT53_BAUPA	M2LG98	M2LT53	Uncharacterized protein.	Uncharacterized protein.	0.796
M2LG98_BAUPA	M2LVJ4_BAUPA	M2LG98	M2LVJ4	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.982
M2LG98_BAUPA	M2MHU2_BAUPA	M2LG98	M2MHU2	Uncharacterized protein.	Uncharacterized protein.	0.972
M2LG98_BAUPA	M2MJ94_BAUPA	M2LG98	M2MJ94	Uncharacterized protein.	Uncharacterized protein.	0.699