42 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2N181_BAUPA	Uncharacterized protein. (83 aa)
	M2ML84_BAUPA	Fork-head domain-containing protein. (793 aa)
	M2MN67_BAUPA	Uncharacterized protein. (240 aa)
	M2MQ59_BAUPA	RPOL4c domain-containing protein. (161 aa)
	M2MQ72_BAUPA	Uncharacterized protein. (386 aa)
	M2MT31_BAUPA	GATA-type domain-containing protein. (936 aa)
	M2MTP9_BAUPA	RPOLD domain-containing protein. (389 aa)
	M2MYP9_BAUPA	RNA_pol_L_2 domain-containing protein. (122 aa)
	cprA	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (695 aa)
	M2MYX1_BAUPA	Cyclin N-terminal domain-containing protein. (520 aa)
	M2MZ44_BAUPA	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1217 aa)
	M2N1V3_BAUPA	Uncharacterized protein. (658 aa)
	M2N2B1_BAUPA	S1 motif domain-containing protein. (171 aa)
	M2N387_BAUPA	Uncharacterized protein. (377 aa)
	M2N508_BAUPA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1789 aa)
	M2N8T8_BAUPA	Protein kinase domain-containing protein. (879 aa)
	M2NBV5_BAUPA	GATA-type domain-containing protein. (311 aa)
	M2NC58_BAUPA	Uncharacterized protein. (422 aa)
	M2NH12_BAUPA	Lipase_3 domain-containing protein. (444 aa)
	M2NI14_BAUPA	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1254 aa)
	M2NIM0_BAUPA	Uncharacterized protein. (444 aa)
	M2NJJ8_BAUPA	BTB domain-containing protein. (926 aa)
	M2NLX5_BAUPA	Uncharacterized protein. (1842 aa)
	M2NN81_BAUPA	Uncharacterized protein. (821 aa)
	M2MJ69_BAUPA	Serine/threonine-protein phosphatase. (446 aa)
	M2MDY4_BAUPA	HATPase_c domain-containing protein. (709 aa)
	M2MCJ7_BAUPA	Uncharacterized protein. (175 aa)
	M2M9E1_BAUPA	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (257 aa)
	M2M956_BAUPA	Uncharacterized protein; Belongs to the cyclin family. (279 aa)
	M2M8E8_BAUPA	Uncharacterized protein; Belongs to the DEAD box helicase family. (485 aa)
	M2M524_BAUPA	Uncharacterized protein. (105 aa)
	M2LY58_BAUPA	Histone H2B; Belongs to the histone H2B family. (141 aa)
	M2LWU2_BAUPA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (137 aa)
	M2LT67_BAUPA	Protein kinase domain-containing protein. (613 aa)
	M2LNC3_BAUPA	RNA_pol_Rpb5_N domain-containing protein. (171 aa)
	M2LLV0_BAUPA	Uncharacterized protein. (982 aa)
	M2LKJ4_BAUPA	Uncharacterized protein. (171 aa)
	M2LH26_BAUPA	Uncharacterized protein. (529 aa)
	M2MZ65_BAUPA	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
	M2MZC9_BAUPA	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (517 aa)
	M2MZD4_BAUPA	Uncharacterized protein. (382 aa)
	M2MK01_BAUPA	Uncharacterized protein. (848 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LH26_BAUPA	M2LKJ4_BAUPA	M2LH26	M2LKJ4	Uncharacterized protein.	Uncharacterized protein.	0.950
M2LH26_BAUPA	M2LNC3_BAUPA	M2LH26	M2LNC3	Uncharacterized protein.	RNA_pol_Rpb5_N domain-containing protein.	0.956
M2LH26_BAUPA	M2LWU2_BAUPA	M2LH26	M2LWU2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.949
M2LH26_BAUPA	M2LY58_BAUPA	M2LH26	M2LY58	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.661
M2LH26_BAUPA	M2MN67_BAUPA	M2LH26	M2MN67	Uncharacterized protein.	Uncharacterized protein.	0.830
M2LH26_BAUPA	M2MQ59_BAUPA	M2LH26	M2MQ59	Uncharacterized protein.	RPOL4c domain-containing protein.	0.948
M2LH26_BAUPA	M2MQ72_BAUPA	M2LH26	M2MQ72	Uncharacterized protein.	Uncharacterized protein.	0.888
M2LH26_BAUPA	M2MTP9_BAUPA	M2LH26	M2MTP9	Uncharacterized protein.	RPOLD domain-containing protein.	0.949
M2LH26_BAUPA	M2MYP9_BAUPA	M2LH26	M2MYP9	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.959
M2LH26_BAUPA	M2MZ65_BAUPA	M2LH26	M2MZ65	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.820
M2LH26_BAUPA	M2MZD4_BAUPA	M2LH26	M2MZD4	Uncharacterized protein.	Uncharacterized protein.	0.820
M2LH26_BAUPA	M2N181_BAUPA	M2LH26	M2N181	Uncharacterized protein.	Uncharacterized protein.	0.952
M2LH26_BAUPA	M2N1V3_BAUPA	M2LH26	M2N1V3	Uncharacterized protein.	Uncharacterized protein.	0.935
M2LH26_BAUPA	M2N387_BAUPA	M2LH26	M2N387	Uncharacterized protein.	Uncharacterized protein.	0.925
M2LH26_BAUPA	M2N508_BAUPA	M2LH26	M2N508	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.443
M2LH26_BAUPA	M2NI14_BAUPA	M2LH26	M2NI14	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.947
M2LH26_BAUPA	M2NJJ8_BAUPA	M2LH26	M2NJJ8	Uncharacterized protein.	BTB domain-containing protein.	0.830
M2LKJ4_BAUPA	M2LH26_BAUPA	M2LKJ4	M2LH26	Uncharacterized protein.	Uncharacterized protein.	0.950
M2LKJ4_BAUPA	M2LNC3_BAUPA	M2LKJ4	M2LNC3	Uncharacterized protein.	RNA_pol_Rpb5_N domain-containing protein.	0.999
M2LKJ4_BAUPA	M2LT67_BAUPA	M2LKJ4	M2LT67	Uncharacterized protein.	Protein kinase domain-containing protein.	0.620