29 items (Baudoinia panamericana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MDM34	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. (602 aa)
	M2LC91_BAUPA	Uncharacterized protein. (175 aa)
	M2LEP2_BAUPA	Uncharacterized protein. (637 aa)
	M2LU73_BAUPA	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (908 aa)
	M2M1S3_BAUPA	BZIP domain-containing protein. (274 aa)
	M2MJ59_BAUPA	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (323 aa)
	M2MM69_BAUPA	Uncharacterized protein. (1017 aa)
	M2MMD4_BAUPA	USP domain-containing protein; Belongs to the peptidase C19 family. (745 aa)
	M2MNR8_BAUPA	Uncharacterized protein. (187 aa)
	M2MQ34_BAUPA	TPR_REGION domain-containing protein. (657 aa)
	M2MRJ5_BAUPA	Uncharacterized protein. (633 aa)
	M2MVK6_BAUPA	CIA30 domain-containing protein. (228 aa)
	M2NQ12_BAUPA	Zn(2)-C6 fungal-type domain-containing protein. (831 aa)
	M2N969_BAUPA	Uncharacterized protein. (458 aa)
	M2N9E3_BAUPA	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (336 aa)
	M2N9Q6_BAUPA	Ubiquitin-like domain-containing protein. (154 aa)
	M2N9T7_BAUPA	UBIQUITIN_CONJUGAT_2 domain-containing protein. (139 aa)
	M2N5Q8_BAUPA	DJ-1_PfpI domain-containing protein. (313 aa)
	M2N2W0_BAUPA	DJ-1_PfpI domain-containing protein. (230 aa)
	M2N2V5_BAUPA	Uncharacterized protein. (376 aa)
	M2NCF5_BAUPA	Autophagy-related protein. (118 aa)
	M2NDW1_BAUPA	Uncharacterized protein. (51 aa)
	M2NEW7_BAUPA	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (2939 aa)
	M2NFR1_BAUPA	Uncharacterized protein. (144 aa)
	M2NJE5_BAUPA	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (141 aa)
	M2NMG6_BAUPA	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (260 aa)
	M2NNL3_BAUPA	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (396 aa)
	M2N6V6_BAUPA	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	M2LBE3_BAUPA	Protein kinase domain-containing protein. (1010 aa)

Your Current Organism:

Baudoinia panamericana

NCBI taxonomy Id: 717646
Other names: B. panamericana UAMH 10762, Baudoinia compniacensis UAMH 10762, Baudoinia panamericana UAMH 10762

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2LBE3_BAUPA	M2MJ59_BAUPA	M2LBE3	M2MJ59	Protein kinase domain-containing protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.981
M2LBE3_BAUPA	M2NCF5_BAUPA	M2LBE3	M2NCF5	Protein kinase domain-containing protein.	Autophagy-related protein.	0.997
M2LBE3_BAUPA	M2NJE5_BAUPA	M2LBE3	M2NJE5	Protein kinase domain-containing protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.982
M2LC91_BAUPA	M2LEP2_BAUPA	M2LC91	M2LEP2	Uncharacterized protein.	Uncharacterized protein.	0.992
M2LC91_BAUPA	M2LU73_BAUPA	M2LC91	M2LU73	Uncharacterized protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.600
M2LC91_BAUPA	M2MMD4_BAUPA	M2LC91	M2MMD4	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.793
M2LC91_BAUPA	M2N2V5_BAUPA	M2LC91	M2N2V5	Uncharacterized protein.	Uncharacterized protein.	0.978
M2LC91_BAUPA	M2NCF5_BAUPA	M2LC91	M2NCF5	Uncharacterized protein.	Autophagy-related protein.	0.435
M2LC91_BAUPA	M2NDW1_BAUPA	M2LC91	M2NDW1	Uncharacterized protein.	Uncharacterized protein.	0.967
M2LC91_BAUPA	M2NFR1_BAUPA	M2LC91	M2NFR1	Uncharacterized protein.	Uncharacterized protein.	0.984
M2LC91_BAUPA	MDM34	M2LC91	M2N4A4	Uncharacterized protein.	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.	0.436
M2LEP2_BAUPA	M2LC91_BAUPA	M2LEP2	M2LC91	Uncharacterized protein.	Uncharacterized protein.	0.992
M2LEP2_BAUPA	M2LU73_BAUPA	M2LEP2	M2LU73	Uncharacterized protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.550
M2LEP2_BAUPA	M2MMD4_BAUPA	M2LEP2	M2MMD4	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.699
M2LEP2_BAUPA	M2N2V5_BAUPA	M2LEP2	M2N2V5	Uncharacterized protein.	Uncharacterized protein.	0.960
M2LEP2_BAUPA	M2NDW1_BAUPA	M2LEP2	M2NDW1	Uncharacterized protein.	Uncharacterized protein.	0.885
M2LEP2_BAUPA	M2NFR1_BAUPA	M2LEP2	M2NFR1	Uncharacterized protein.	Uncharacterized protein.	0.963
M2LU73_BAUPA	M2LC91_BAUPA	M2LU73	M2LC91	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.600
M2LU73_BAUPA	M2LEP2_BAUPA	M2LU73	M2LEP2	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.550
M2LU73_BAUPA	M2MJ59_BAUPA	M2LU73	M2MJ59	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.814