Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEG31178.1 | cmk | Thicy_0404 | Thicy_0814 | TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: bbe:BBR47_08490 pseudouridine synthase; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: tcx:Tcr_1197 cytidylate kinase. | 0.640 |
| AEG31178.1 | der | Thicy_0404 | Thicy_0240 | TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: bbe:BBR47_08490 pseudouridine synthase; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.526 |
| AEG31203.1 | AEG32232.1 | Thicy_0429 | Thicy_1472 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | PFAM: Conserved hypothetical protein CHP00730; KEGG: tcx:Tcr_1882 hypothetical protein. | 0.923 |
| AEG31203.1 | apt | Thicy_0429 | Thicy_1641 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.900 |
| AEG31203.1 | cmk | Thicy_0429 | Thicy_0814 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: tcx:Tcr_1197 cytidylate kinase. | 0.900 |
| AEG31203.1 | dut | Thicy_0429 | Thicy_0284 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.901 |
| AEG31203.1 | gmk | Thicy_0429 | Thicy_0076 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.900 |
| AEG31203.1 | ppnP | Thicy_0429 | Thicy_0443 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | UPF0345 protein yaiE; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.911 |
| AEG31203.1 | surE | Thicy_0429 | Thicy_0714 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.900 |
| AEG31203.1 | tmk | Thicy_0429 | Thicy_1137 | KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.900 |
| AEG31485.1 | AEG31488.1 | Thicy_0713 | Thicy_0716 | KEGG: tcx:Tcr_1258 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal. | PFAM: SNARE associated Golgi protein; KEGG: tcx:Tcr_1255 hypothetical protein. | 0.610 |
| AEG31485.1 | pcm | Thicy_0713 | Thicy_0715 | KEGG: tcx:Tcr_1258 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal. | Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.622 |
| AEG31485.1 | surE | Thicy_0713 | Thicy_0714 | KEGG: tcx:Tcr_1258 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal. | Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.673 |
| AEG31488.1 | AEG31485.1 | Thicy_0716 | Thicy_0713 | PFAM: SNARE associated Golgi protein; KEGG: tcx:Tcr_1255 hypothetical protein. | KEGG: tcx:Tcr_1258 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal. | 0.610 |
| AEG31488.1 | pcm | Thicy_0716 | Thicy_0715 | PFAM: SNARE associated Golgi protein; KEGG: tcx:Tcr_1255 hypothetical protein. | Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.821 |
| AEG31488.1 | surE | Thicy_0716 | Thicy_0714 | PFAM: SNARE associated Golgi protein; KEGG: tcx:Tcr_1255 hypothetical protein. | Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.812 |
| AEG31960.1 | AEG31961.1 | Thicy_1193 | Thicy_1194 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | PFAM: Ribonucleotide reductase; KEGG: tcx:Tcr_1763 ribonucleotide-diphosphate reductase subunit beta. | 0.999 |
| AEG31960.1 | cmk | Thicy_1193 | Thicy_0814 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: tcx:Tcr_1197 cytidylate kinase. | 0.914 |
| AEG31960.1 | dcd | Thicy_1193 | Thicy_0590 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | 0.470 |
| AEG31960.1 | dut | Thicy_1193 | Thicy_0284 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.683 |
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