STRINGSTRING
ADZ90355.1 ADZ90355.1 ADZ90361.1 ADZ90361.1 ADZ90968.1 ADZ90968.1 ADZ92451.1 ADZ92451.1 ADZ92900.1 ADZ92900.1 ADZ90341.1 ADZ90341.1 ADZ89499.1 ADZ89499.1 ADZ90351.1 ADZ90351.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ90355.1KEGG: eta:ETA_05220 HrpJ protein (hrp cluster); TIGRFAM: Type III secretion regulator, YopN/LcrE/InvE/MxiC; PFAM: Hypersensitivity response secretion-like, HrpJ. (370 aa)
ADZ90361.1TIGRFAM: Type III secretion system, YscI/HrpB; KEGG: ddc:Dd586_1895 type III secretion apparatus protein, YscI/HrpB family. (129 aa)
ADZ90968.1PFAM: Multiple antibiotic resistance (MarC)-related; KEGG: mmw:Mmwyl1_2070 multiple antibiotic resistance (MarC)-like protein. (203 aa)
ADZ92451.1TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; KEGG: mmw:Mmwyl1_3445 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core. (449 aa)
ADZ92900.1PFAM: Pentapeptide repeat; KEGG: mmw:Mmwyl1_0563 pentapeptide repeat-containing protein. (349 aa)
ADZ90341.1KEGG: ddc:Dd586_2005 DspFAvrF family protein. (145 aa)
ADZ89499.1KEGG: mmw:Mmwyl1_0290 multiple antibiotic resistance (MarC)-like protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related. (205 aa)
ADZ90351.1ATPase, FliI/YscN family; SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type III secretion system, FliI/YscN; KEGG: epy:EpC_30890 hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-HrcN protein; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal. (468 aa)
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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