STRINGSTRING
ADZ91352.1 ADZ91352.1 ADZ91386.1 ADZ91386.1 ADZ91399.1 ADZ91399.1 selO selO ADZ91523.1 ADZ91523.1 ADZ91712.1 ADZ91712.1 miaA miaA ADZ92034.1 ADZ92034.1 ADZ92105.1 ADZ92105.1 hemA hemA ispE ispE ADZ92201.1 ADZ92201.1 ADZ92244.1 ADZ92244.1 ADZ93014.1 ADZ93014.1 ADZ93188.1 ADZ93188.1 ADZ93267.1 ADZ93267.1 nadD nadD ADZ90697.1 ADZ90697.1 ADZ90661.1 ADZ90661.1 clpS clpS ADZ90552.1 ADZ90552.1 ADZ90327.1 ADZ90327.1 ADZ90200.1 ADZ90200.1 ADZ89946.1 ADZ89946.1 ADZ89748.1 ADZ89748.1 ADZ89659.1 ADZ89659.1 ADZ89639.1 ADZ89639.1 ADZ89599.1 ADZ89599.1 ADZ89584.1 ADZ89584.1 ADZ89460.1 ADZ89460.1 ADZ93374.1 ADZ93374.1 ADZ90762.1 ADZ90762.1 ADZ90885.1 ADZ90885.1 ADZ90899.1 ADZ90899.1 ADZ90903.1 ADZ90903.1 ADZ90971.1 ADZ90971.1 ADZ91058.1 ADZ91058.1 ADZ91146.1 ADZ91146.1 ADZ91199.1 ADZ91199.1 ADZ91204.1 ADZ91204.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ91352.1Helicase domain protein; KEGG: she:Shewmr4_3328 DEAD/DEAH box helicase domain-containing protein; PFAM: Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal. (717 aa)
ADZ91386.1KEGG: mmw:Mmwyl1_2210 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. (801 aa)
ADZ91399.1PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: mmw:Mmwyl1_2220 cobalamin (vitamin B12) biosynthesis CbiX protein. (125 aa)
selOUPF0061 protein ydiU; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (472 aa)
ADZ91523.1Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (550 aa)
ADZ91712.1Serine--pyruvate transaminase; Manually curated; KEGG: mmw:Mmwyl1_1792 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase. (401 aa)
miaAtRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (310 aa)
ADZ92034.1PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: sbl:Sbal_1878 glutathione-dependent formaldehyde-activating, GFA. (115 aa)
ADZ92105.1Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily. (287 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (439 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (301 aa)
ADZ92201.1PFAM: DTW; KEGG: mmw:Mmwyl1_3616 hypothetical protein. (157 aa)
ADZ92244.1Uncharacterized protein family UPF0310; PFAM: Protein of unknown function DUF55; KEGG: mmw:Mmwyl1_2907 hypothetical protein. (150 aa)
ADZ93014.1OHCU decarboxylase; KEGG: mmw:Mmwyl1_2708 hypothetical protein; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. (177 aa)
ADZ93188.1TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; Helicase, C-terminal; Helicase-associated domain; KEGG: mmw:Mmwyl1_4224 ATP-dependent helicase HrpB; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal. (852 aa)
ADZ93267.1KEGG: ppg:PputGB1_0526 DNA-cytosine methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; PFAM: C-5 cytosine methyltransferase. (378 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (226 aa)
ADZ90697.1KEGG: swd:Swoo_2240 glutathione-dependent formaldehyde-activating, GFA. (134 aa)
ADZ90661.1Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mmw:Mmwyl1_0159 metallophosphoesterase. (443 aa)
clpSATP-dependent Clp protease adapter protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (117 aa)
ADZ90552.1Sirohydrochlorin ferrochelatase; KEGG: mmw:Mmwyl1_1378 cobalamin (vitamin B12) biosynthesis CbiX protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiX. (420 aa)
ADZ90327.1KEGG: mmw:Mmwyl1_1152 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal. (497 aa)
ADZ90200.1KEGG: vha:VIBHAR_01778 site-specific DNA-methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; PFAM: C-5 cytosine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (383 aa)
ADZ89946.1KEGG: mmw:Mmwyl1_3783 hypothetical protein. (327 aa)
ADZ89748.1Cryptochrome, DASH family; KEGG: mmw:Mmwyl1_0336 cryptochrome DASH; TIGRFAM: Cryptochrome, DASH; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal. (458 aa)
ADZ89659.1KEGG: pin:Ping_0706 transcriptional coactivator/pterin dehydratase; HAMAP: Transcriptional coactivator/pterin dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase. (98 aa)
ADZ89639.1PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: sde:Sde_0707 hypothetical protein. (134 aa)
ADZ89599.1Riboflavin biosynthesis protein RibF; SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: mmw:Mmwyl1_4231 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; Belongs to the ribF family. (309 aa)
ADZ89584.1PFAM: Peptidase M16C associated; Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: mmw:Mmwyl1_4245 peptidase M16C associated domain-containing protein. (974 aa)
ADZ89460.1Serine--pyruvate transaminase; KEGG: mmw:Mmwyl1_0454 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase. (406 aa)
ADZ93374.1PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: rru:Rru_A0460 NADP oxidoreductase, coenzyme F420-dependent. (226 aa)
ADZ90762.1KEGG: mmw:Mmwyl1_2829 DTW domain-containing protein; manually curated; PFAM: DTW. (198 aa)
ADZ90885.1KEGG: mmw:Mmwyl1_0123 beta-lactamase-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like. (365 aa)
ADZ90899.1PFAM: DTW; KEGG: mmw:Mmwyl1_2540 DTW domain-containing protein. (233 aa)
ADZ90903.1KEGG: mmw:Mmwyl1_2536 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit. (216 aa)
ADZ90971.1PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: vsp:VS_1599 hypothetical protein. (137 aa)
ADZ91058.1TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; KEGG: mmw:Mmwyl1_2519 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal. (1296 aa)
ADZ91146.1KEGG: mmw:Mmwyl1_2430 hypothetical protein. (287 aa)
ADZ91199.1PFAM: Protein of unknown function DUF77; KEGG: vfi:VF_1442 hypothetical protein. (113 aa)
ADZ91204.1MOSC domain containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; KEGG: mmw:Mmwyl1_2174 MOSC domain-containing protein. (277 aa)
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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