STRINGSTRING
nrtD-2 nrtD-2 CCB66764.1 CCB66764.1 CCB66765.1 CCB66765.1 ssuB-5 ssuB-5 CCB67174.1 CCB67174.1 CCB67175.1 CCB67175.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nrtD-2Nitrate transport ATP-binding protein nrtD; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (266 aa)
CCB66764.1Binding-protein-dependent transport systems inner membrane component. (285 aa)
CCB66765.1Homologs of previously reported genes of unknown function. (329 aa)
ssuB-5ATP-binding component of ABC superfamily; Function of strongly homologous gene; transporter. (296 aa)
CCB67174.1Putative Nitrate transport permease protein nrtB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (267 aa)
CCB67175.1NMT1/THI5 like domain protein. (340 aa)
Your Current Organism:
Hyphomicrobium sp. MC1
NCBI taxonomy Id: 717785
Other names: H. sp. MC1
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