STRINGSTRING
AL1_05310 AL1_05310 AL1_05480 AL1_05480 AL1_06320 AL1_06320 AL1_07000 AL1_07000 AL1_11010 AL1_11010 AL1_11870 AL1_11870 AL1_12440 AL1_12440 AL1_13550 AL1_13550 queE queE AL1_17330 AL1_17330 AL1_17640 AL1_17640 AL1_18140 AL1_18140 AL1_20910 AL1_20910 AL1_21360 AL1_21360 AL1_21890 AL1_21890 AL1_21900 AL1_21900 AL1_21910 AL1_21910 AL1_22150 AL1_22150 AL1_22280 AL1_22280 AL1_23090 AL1_23090 AL1_24700 AL1_24700 AL1_25680 AL1_25680 AL1_27740 AL1_27740 AL1_28380 AL1_28380 AL1_29970 AL1_29970 AL1_30010 AL1_30010 AL1_31950 AL1_31950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AL1_05310Protein of unknown function (DUF3276). (98 aa)
AL1_05480Hypothetical protein. (989 aa)
AL1_06320Acyl-CoA reductase (LuxC). (328 aa)
AL1_07000Protein of unknown function (DUF3109). (190 aa)
AL1_11010Protein of unknown function (DUF3108). (265 aa)
AL1_11870DoxX. (368 aa)
AL1_12440Hypothetical protein. (150 aa)
AL1_13550GH3 auxin-responsive promoter. (491 aa)
queEOrganic radical activating enzymes; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (211 aa)
AL1_17330Bacterial membrane protein YfhO. (830 aa)
AL1_17640Methylase involved in ubiquinone/menaquinone biosynthesis. (261 aa)
AL1_18140PAP2 superfamily. (222 aa)
AL1_20910GSCFA family. (321 aa)
AL1_21360Protein of unknown function (DUF3127). (120 aa)
AL1_21890Outer membrane protein assembly complex, YaeT protein. (860 aa)
AL1_21900Outer membrane protein. (168 aa)
AL1_21910Outer membrane protein. (180 aa)
AL1_22150Hypothetical protein. (227 aa)
AL1_22280Acyl-protein synthetase, LuxE. (321 aa)
AL1_23090DNA uptake lipoprotein. (249 aa)
AL1_24700Parvulin-like peptidyl-prolyl isomerase. (463 aa)
AL1_25680Protein of unknown function (DUF2723). (1075 aa)
AL1_27740Signal peptidase I, bacterial type; Belongs to the peptidase S26 family. (450 aa)
AL1_28380Protein of unknown function (DUF2795). (73 aa)
AL1_29970PPIC-type PPIASE domain. (676 aa)
AL1_30010Hypothetical protein. (444 aa)
AL1_31950Thiol:disulfide interchange protein. (163 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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