STRINGSTRING
AL1_21890 AL1_21890 AL1_21900 AL1_21900 AL1_21910 AL1_21910 AL1_22150 AL1_22150 AL1_23090 AL1_23090 AL1_27740 AL1_27740 AL1_29970 AL1_29970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AL1_21890Outer membrane protein assembly complex, YaeT protein. (860 aa)
AL1_21900Outer membrane protein. (168 aa)
AL1_21910Outer membrane protein. (180 aa)
AL1_22150Hypothetical protein. (227 aa)
AL1_23090DNA uptake lipoprotein. (249 aa)
AL1_27740Signal peptidase I, bacterial type; Belongs to the peptidase S26 family. (450 aa)
AL1_29970PPIC-type PPIASE domain. (676 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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