STRINGSTRING
AL1_02050 AL1_02050 aroK aroK dapA dapA purA purA AL1_04530 AL1_04530 AL1_04540 AL1_04540 udk udk purT purT AL1_04860 AL1_04860 glyA glyA AL1_05090 AL1_05090 AL1_05100 AL1_05100 AL1_05130 AL1_05130 AL1_05290 AL1_05290 AL1_05590 AL1_05590 AL1_05600 AL1_05600 AL1_06700 AL1_06700 fmt fmt AL1_06940 AL1_06940 serC serC AL1_08350 AL1_08350 AL1_10280 AL1_10280 AL1_10350 AL1_10350 AL1_10360 AL1_10360 AL1_10900 AL1_10900 guaB guaB guaA guaA tmk tmk AL1_13070 AL1_13070 aroC aroC aroA aroA AL1_13990 AL1_13990 aroQ aroQ AL1_14980 AL1_14980 AL1_16170 AL1_16170 AL1_17020 AL1_17020 surE surE argH argH argB argB AL1_17560 AL1_17560 AL1_17570 AL1_17570 argC argC AL1_17590 AL1_17590 AL1_17600 AL1_17600 AL1_18100 AL1_18100 AL1_20180 AL1_20180 AL1_20190 AL1_20190 AL1_20980 AL1_20980 AL1_21070 AL1_21070 AL1_21400 AL1_21400 AL1_21410 AL1_21410 AL1_22110 AL1_22110 AL1_22470 AL1_22470 AL1_22480 AL1_22480 AL1_22930 AL1_22930 AL1_23200 AL1_23200 AL1_23220 AL1_23220 asd asd AL1_23690 AL1_23690 AL1_24020 AL1_24020 AL1_25310 AL1_25310 AL1_25320 AL1_25320 tdk tdk dapB dapB folD folD purD purD purN purN purM purM purF purF purC purC AL1_30770 AL1_30770 AL1_30780 AL1_30780 purK purK purE purE pyrE pyrE AL1_30840 AL1_30840 AL1_30850 AL1_30850 pyrF pyrF pyrD pyrD pyrK pyrK carB carB carA carA pyrC pyrC AL1_31300 AL1_31300 AL1_31800 AL1_31800 hisG hisG hisD hisD hisB hisB hisH hisH hisA hisA hisF hisF hisI hisI
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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AL1_02050Diaminopimelate decarboxylase. (464 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (175 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (284 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (421 aa)
AL1_04530Carboxynorspermidine dehydrogenase. (396 aa)
AL1_04540Carboxynorspermidine decarboxylase. (379 aa)
udkUridine kinase. (207 aa)
purTFormate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. (389 aa)
AL1_04860Aspartate/tyrosine/aromatic aminotransferase. (395 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (426 aa)
AL1_05090Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family. (260 aa)
AL1_05100Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. (455 aa)
AL1_05130Uridine phosphorylase. (292 aa)
AL1_05290Shikimate dehydrogenase. (245 aa)
AL1_05590EamA-like transporter family. (301 aa)
AL1_05600Diaminopimelate decarboxylase. (387 aa)
AL1_06700Homoserine dehydrogenase. (402 aa)
fmtmethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (323 aa)
AL1_06940D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (333 aa)
serCPhosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (357 aa)
AL1_08350Threonine synthase. (430 aa)
AL1_10280Inosine-uridine nucleoside N-ribohydrolase. (342 aa)
AL1_10350Prephenate dehydratase. (281 aa)
AL1_10360Chorismate mutase. (354 aa)
AL1_10900Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (397 aa)
guaBInosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (492 aa)
guaAGMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. (508 aa)
tmkThymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (228 aa)
AL1_13070Prephenate dehydrogenase. (280 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (325 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (414 aa)
AL1_13990Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (180 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (142 aa)
AL1_14980Uracil phosphoribosyltransferase. (218 aa)
AL1_16170Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (193 aa)
AL1_17020Cytidine deaminase. (151 aa)
surE5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (273 aa)
argHArgininosuccinate lyase. (418 aa)
argBN-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (257 aa)
AL1_17560N-acetylornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (318 aa)
AL1_17570Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (376 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (320 aa)
AL1_17590Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (401 aa)
AL1_17600Hypothetical protein. (206 aa)
AL1_18100Histidinol phosphatase and related hydrolases of the PHP family. (396 aa)
AL1_201803-dehydroquinate synthetase. (233 aa)
AL1_201903-dehydroquinate synthetase. (107 aa)
AL1_20980Deoxycytidylate deaminase. (145 aa)
AL1_21070Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (268 aa)
AL1_21400Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. (346 aa)
AL1_214104-phosphoerythronate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. (331 aa)
AL1_22110Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (850 aa)
AL1_22470Uridine kinase. (556 aa)
AL1_224805'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family. (478 aa)
AL1_22930L-lysine 2,3-aminomutase. (699 aa)
AL1_23200Tetrahydrodipicolinate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (275 aa)
AL1_23220Aspartate kinase; Belongs to the aspartokinase family. (418 aa)
asdAspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (330 aa)
AL1_23690Sulfide dehydrogenase (flavoprotein) subunit SudB. (294 aa)
AL1_24020Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (448 aa)
AL1_253105,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (318 aa)
AL1_25320Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1204 aa)
tdkThymidine kinase. (191 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (253 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (285 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (418 aa)
purNFormyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (186 aa)
purMPhosphoribosylformylglycinamidine cyclo-ligase. (341 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (472 aa)
purCPhosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. (238 aa)
AL1_30770Metal-dependent hydrolase. (327 aa)
AL1_30780Phosphoribosylformylglycinamidine synthase. (1239 aa)
purKPhosphoribosylaminoimidazole carboxylase, PurK protein; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (363 aa)
purE5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (155 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (209 aa)
AL1_30840Peptidase family S41. (369 aa)
AL1_30850Glutaredoxin. (86 aa)
pyrFOrotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (234 aa)
pyrDDihydroorotate oxidase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. (303 aa)
pyrKDihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (246 aa)
carBCarbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (1060 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (363 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (424 aa)
AL1_31300RibD C-terminal domain. (137 aa)
AL1_318005,10-methenyltetrahydrofolate synthetase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (177 aa)
hisGATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (283 aa)
hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (431 aa)
hisBImidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. In the N-terminal section; belongs to the histidinol- phosphatase family. (375 aa)
hisHImidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (198 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylidene amino] imidazole-4-carboxamide isomerase. (242 aa)
hisFImidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (250 aa)
hisIphosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. (206 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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