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pckA pckA gpmI gpmI AL1_05880 AL1_05880 gpmA gpmA AL1_10420 AL1_10420 AL1_10430 AL1_10430 tpiA tpiA pgi pgi AL1_24060 AL1_24060 AL1_26000 AL1_26000 AL1_26830 AL1_26830 pfkA pfkA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (535 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa)
AL1_05880Anaerobic ribonucleoside-triphosphate reductase activating protein. (156 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (248 aa)
AL1_10420Formate acetyltransferase 1. (742 aa)
AL1_10430Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (232 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (252 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (444 aa)
AL1_24060Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (338 aa)
AL1_26000Hydrogenase 4 membrane component (E). (209 aa)
AL1_26830L-serine ammonia-lyase. (380 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (326 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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