STRINGSTRING
AL1_18370 AL1_18370 AL1_31470 AL1_31470 AL1_31460 AL1_31460 AL1_30630 AL1_30630 kdsB kdsB AL1_29720 AL1_29720 AL1_28750 AL1_28750 AL1_28640 AL1_28640 AL1_26830 AL1_26830 AL1_26690 AL1_26690 AL1_26410 AL1_26410 lpxD lpxD AL1_22420 AL1_22420 AL1_21750 AL1_21750 pgi pgi lpxK lpxK AL1_20060 AL1_20060 AL1_19160 AL1_19160 AL1_18590 AL1_18590 AL1_18500 AL1_18500 AL1_18450 AL1_18450 AL1_18430 AL1_18430 AL1_18400 AL1_18400 AL1_18150 AL1_18150 AL1_18140 AL1_18140 tpiA tpiA AL1_17270 AL1_17270 AL1_15310 AL1_15310 AL1_15300 AL1_15300 AL1_14970 AL1_14970 AL1_13050 AL1_13050 AL1_11520 AL1_11520 pckA pckA AL1_10440 AL1_10440 gpmA gpmA AL1_06540 AL1_06540 AL1_05950 AL1_05950 AL1_05400 AL1_05400 AL1_05300 AL1_05300 AL1_04940 AL1_04940 AL1_04850 AL1_04850 AL1_04490 AL1_04490 AL1_02570 AL1_02570 AL1_02530 AL1_02530 AL1_02500 AL1_02500 AL1_01180 AL1_01180 lpxC lpxC AL1_00750 AL1_00750 AL1_00510 AL1_00510
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AL1_18370Hypothetical protein. (345 aa)
AL1_31470Hypothetical protein. (570 aa)
AL1_31460Predicted membrane protein. (122 aa)
AL1_30630Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. (636 aa)
kdsB3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (254 aa)
AL1_297203-deoxy-8-phosphooctulonate synthase; Belongs to the KdsA family. (250 aa)
AL1_28750Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. (685 aa)
AL1_28640Predicted membrane protein. (131 aa)
AL1_26830L-serine ammonia-lyase. (380 aa)
AL1_26690Uncharacterized protein conserved in bacteria. (260 aa)
AL1_26410Nucleotide sugar dehydrogenase. (438 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (348 aa)
AL1_22420Hypothetical protein. (576 aa)
AL1_21750PAP2 superfamily. (410 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (444 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (347 aa)
AL1_20060GtrA-like protein. (164 aa)
AL1_19160Protein of unknown function (DUF3184). (320 aa)
AL1_18590Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (301 aa)
AL1_18500Na+-driven multidrug efflux pump. (404 aa)
AL1_18450Predicted nucleoside-diphosphate sugar epimerases. (505 aa)
AL1_18430Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
AL1_18400Hypothetical protein. (361 aa)
AL1_18150Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family. (501 aa)
AL1_18140PAP2 superfamily. (222 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (252 aa)
AL1_17270Glycogen synthase (UDP-glucose). (268 aa)
AL1_153103-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. (181 aa)
AL1_15300Membrane protein involved in the export of O-antigen and teichoic acid. (488 aa)
AL1_14970Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. (611 aa)
AL1_130503-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (352 aa)
AL1_11520Predicted glycosyltransferases. (338 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (535 aa)
AL1_10440Uncharacterized protein conserved in bacteria. (384 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (248 aa)
AL1_06540Aldo/keto reductases, related to diketogulonate reductase. (280 aa)
AL1_05950Predicted membrane-associated, metal-dependent hydrolase. (512 aa)
AL1_05400Predicted phosphohydrolases. (385 aa)
AL1_05300Predicted membrane protein. (313 aa)
AL1_04940Predicted membrane-associated, metal-dependent hydrolase. (573 aa)
AL1_04850Predicted acyltransferases. (385 aa)
AL1_04490Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (294 aa)
AL1_02570Glycosidases. (411 aa)
AL1_02530Capsular exopolysaccharide family. (818 aa)
AL1_02500Hypothetical protein. (291 aa)
AL1_011801,4-alpha-glucan branching enzyme. (678 aa)
lpxC3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. (463 aa)
AL1_00750acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (264 aa)
AL1_00510Glycosidases. (435 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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