STRINGSTRING
AL1_00260 AL1_00260 AL1_00330 AL1_00330 AL1_00530 AL1_00530 AL1_00540 AL1_00540 AL1_00550 AL1_00550 AL1_00900 AL1_00900 AL1_01230 AL1_01230 AL1_01240 AL1_01240 AL1_02120 AL1_02120 AL1_02140 AL1_02140 AL1_02380 AL1_02380 AL1_02590 AL1_02590 AL1_04150 AL1_04150 AL1_04160 AL1_04160 AL1_04170 AL1_04170 AL1_04270 AL1_04270 AL1_04440 AL1_04440 AL1_04510 AL1_04510 AL1_04560 AL1_04560 AL1_04820 AL1_04820 AL1_04950 AL1_04950 AL1_05480 AL1_05480 AL1_05700 AL1_05700 AL1_05840 AL1_05840 AL1_06160 AL1_06160 AL1_06180 AL1_06180 AL1_06280 AL1_06280 AL1_06900 AL1_06900 AL1_07230 AL1_07230 AL1_07270 AL1_07270 AL1_07810 AL1_07810 AL1_07820 AL1_07820 AL1_07950 AL1_07950 AL1_07960 AL1_07960 AL1_08180 AL1_08180 AL1_08190 AL1_08190 AL1_08650 AL1_08650 AL1_09130 AL1_09130 AL1_09250 AL1_09250 AL1_09470 AL1_09470 AL1_09580 AL1_09580 AL1_09660 AL1_09660 AL1_10290 AL1_10290 AL1_10300 AL1_10300 AL1_11270 AL1_11270 AL1_11350 AL1_11350 AL1_11420 AL1_11420 AL1_11670 AL1_11670 AL1_11800 AL1_11800 AL1_11930 AL1_11930 AL1_12310 AL1_12310 AL1_12820 AL1_12820 AL1_13760 AL1_13760 AL1_13790 AL1_13790 AL1_13860 AL1_13860 AL1_13930 AL1_13930 AL1_14220 AL1_14220 AL1_14300 AL1_14300 AL1_14470 AL1_14470 AL1_14480 AL1_14480 AL1_14790 AL1_14790 AL1_14810 AL1_14810 AL1_15230 AL1_15230 AL1_15780 AL1_15780 AL1_15790 AL1_15790 AL1_15800 AL1_15800 AL1_15940 AL1_15940 AL1_16570 AL1_16570 nth nth AL1_17200 AL1_17200 AL1_17680 AL1_17680 AL1_18260 AL1_18260 AL1_18710 AL1_18710 AL1_18850 AL1_18850 AL1_18860 AL1_18860 AL1_19160 AL1_19160 AL1_19260 AL1_19260 AL1_19790 AL1_19790 AL1_20950 AL1_20950 AL1_21030 AL1_21030 AL1_21040 AL1_21040 AL1_21250 AL1_21250 AL1_22890 AL1_22890 AL1_22990 AL1_22990 AL1_23090 AL1_23090 AL1_23100 AL1_23100 AL1_23290 AL1_23290 AL1_23300 AL1_23300 AL1_23610 AL1_23610 AL1_23770 AL1_23770 AL1_23900 AL1_23900 AL1_25080 AL1_25080 AL1_25110 AL1_25110 AL1_25850 AL1_25850 AL1_26110 AL1_26110 AL1_26170 AL1_26170 AL1_26180 AL1_26180 AL1_26460 AL1_26460 AL1_26470 AL1_26470 AL1_26820 AL1_26820 AL1_27410 AL1_27410 AL1_27480 AL1_27480 AL1_27500 AL1_27500 AL1_27610 AL1_27610 truA truA AL1_28770 AL1_28770 AL1_30010 AL1_30010 AL1_30380 AL1_30380 AL1_30390 AL1_30390 AL1_30600 AL1_30600 AL1_30680 AL1_30680 AL1_31030 AL1_31030 AL1_31040 AL1_31040 AL1_31550 AL1_31550 AL1_31710 AL1_31710 AL1_32240 AL1_32240 AL1_32400 AL1_32400 AL1_32410 AL1_32410 AL1_32710 AL1_32710 AL1_32720 AL1_32720
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AL1_00260TonB-dependent Receptor Plug Domain./TonB dependent receptor. (1091 aa)
AL1_00330Outer membrane receptor proteins, mostly Fe transport. (1013 aa)
AL1_00530Hypothetical protein. (604 aa)
AL1_00540SusD family. (552 aa)
AL1_00550Outer membrane receptor for ferrienterochelin and colicins. (973 aa)
AL1_00900Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit. (343 aa)
AL1_01230Outer membrane receptor proteins, mostly Fe transport. (1050 aa)
AL1_01240SusD family. (547 aa)
AL1_02120Hypothetical protein. (85 aa)
AL1_02140SusD family. (487 aa)
AL1_02380Conserved hypothetical protein TIGR02757. (257 aa)
AL1_02590Hypothetical protein. (786 aa)
AL1_04150SusD family. (505 aa)
AL1_04160TonB dependent receptor. (261 aa)
AL1_04170Outer membrane cobalamin receptor protein. (745 aa)
AL1_04270Hypothetical protein. (1090 aa)
AL1_04440Hypothetical protein. (829 aa)
AL1_04510Hypothetical protein. (362 aa)
AL1_04560Outer membrane cobalamin receptor protein. (622 aa)
AL1_04820FOG: WD40-like repeat. (628 aa)
AL1_04950Hypothetical protein. (398 aa)
AL1_05480Hypothetical protein. (989 aa)
AL1_05700SusD family. (505 aa)
AL1_05840Outer membrane cobalamin receptor protein. (626 aa)
AL1_06160Outer membrane cobalamin receptor protein. (692 aa)
AL1_06180Hypothetical protein. (413 aa)
AL1_06280Outer membrane receptor for ferrienterochelin and colicins. (758 aa)
AL1_06900Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit. (255 aa)
AL1_07230N-acetyl-beta-hexosaminidase. (686 aa)
AL1_07270Outer membrane receptor proteins, mostly Fe transport. (1106 aa)
AL1_07810Outer membrane receptor proteins, mostly Fe transport. (1115 aa)
AL1_07820SusD family. (427 aa)
AL1_07950SusD family. (462 aa)
AL1_07960Fibronectin type III domain./PQQ enzyme repeat. (671 aa)
AL1_08180SusD family. (609 aa)
AL1_08190Outer membrane receptor proteins, mostly Fe transport. (1045 aa)
AL1_08650Outer membrane receptor proteins, mostly Fe transport. (1074 aa)
AL1_09130Outer membrane receptor proteins, mostly Fe transport. (791 aa)
AL1_09250Hypothetical protein. (763 aa)
AL1_09470Outer membrane cobalamin receptor protein. (139 aa)
AL1_09580Outer membrane receptor proteins, mostly Fe transport. (914 aa)
AL1_09660Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (490 aa)
AL1_10290Outer membrane receptor for ferrienterochelin and colicins. (1092 aa)
AL1_10300SusD family. (600 aa)
AL1_11270Outer membrane receptor for ferrienterochelin and colicins. (935 aa)
AL1_11350Outer membrane receptor proteins, mostly Fe transport. (762 aa)
AL1_11420Outer membrane cobalamin receptor protein. (1139 aa)
AL1_11670Hypothetical protein. (423 aa)
AL1_11800SusD family. (629 aa)
AL1_11930Hypothetical protein. (579 aa)
AL1_12310Hypothetical protein. (199 aa)
AL1_12820Outer membrane cobalamin receptor protein. (665 aa)
AL1_13760N-acetyl-beta-hexosaminidase. (617 aa)
AL1_13790N-acetyl-beta-hexosaminidase. (528 aa)
AL1_13860Outer membrane receptor proteins, mostly Fe transport. (1022 aa)
AL1_13930N-acetyl-beta-hexosaminidase. (578 aa)
AL1_14220Hypothetical protein. (284 aa)
AL1_14300Outer membrane receptor for ferrienterochelin and colicins. (788 aa)
AL1_14470Hypothetical protein. (100 aa)
AL1_14480TonB-dependent Receptor Plug Domain./TonB dependent receptor. (919 aa)
AL1_14790SusD family. (555 aa)
AL1_14810Hypothetical protein. (115 aa)
AL1_15230Hypothetical protein. (269 aa)
AL1_15780Outer membrane receptor proteins, mostly Fe transport. (1005 aa)
AL1_15790SusD family. (564 aa)
AL1_15800Hypothetical protein. (419 aa)
AL1_15940Predicted esterase of the alpha-beta hydrolase superfamily. (755 aa)
AL1_16570Hypothetical protein. (748 aa)
nthDNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (220 aa)
AL1_17200Hypothetical protein. (474 aa)
AL1_17680Gram-negative bacterial tonB protein. (182 aa)
AL1_18260Outer membrane protein/protective antigen OMA87. (770 aa)
AL1_18710Long-chain fatty acid transport protein. (561 aa)
AL1_18850Outer membrane receptor for ferrienterochelin and colicins. (1060 aa)
AL1_18860SusD family. (548 aa)
AL1_19160Protein of unknown function (DUF3184). (320 aa)
AL1_19260N-acetyl-beta-hexosaminidase. (525 aa)
AL1_19790Hypothetical protein. (581 aa)
AL1_20950Predicted metal-sulfur cluster biosynthetic enzyme. (106 aa)
AL1_21030TonB-dependent Receptor Plug Domain./TonB dependent receptor. (1124 aa)
AL1_21040SusD family. (233 aa)
AL1_21250Hypothetical protein. (885 aa)
AL1_22890Uncharacterized protein conserved in bacteria. (193 aa)
AL1_22990Hypothetical protein. (216 aa)
AL1_23090DNA uptake lipoprotein. (249 aa)
AL1_23100Hypothetical protein. (203 aa)
AL1_23290SusD family. (549 aa)
AL1_23300TonB-dependent Receptor Plug Domain./TonB dependent receptor. (1089 aa)
AL1_23610SusD family. (427 aa)
AL1_23770Outer membrane receptor proteins, mostly Fe transport. (1010 aa)
AL1_23900Outer membrane receptor proteins, mostly Fe transport. (793 aa)
AL1_25080N-acetyl-beta-hexosaminidase. (553 aa)
AL1_25110SusD family. (588 aa)
AL1_25850Outer membrane receptor proteins, mostly Fe transport. (1064 aa)
AL1_26110SusD family. (584 aa)
AL1_26170SusD family. (507 aa)
AL1_26180Outer membrane receptor proteins, mostly Fe transport. (1022 aa)
AL1_26460SusD family. (553 aa)
AL1_26470Outer membrane cobalamin receptor protein. (1044 aa)
AL1_26820Long-chain fatty acid transport protein. (487 aa)
AL1_27410SusD family. (476 aa)
AL1_27480PKD domain. (598 aa)
AL1_27500Outer membrane cobalamin receptor protein. (726 aa)
AL1_27610TonB-dependent Receptor Plug Domain. (930 aa)
truAPseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (259 aa)
AL1_28770TonB dependent receptor. (944 aa)
AL1_30010Hypothetical protein. (444 aa)
AL1_30380Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein. (230 aa)
AL1_30390Hypothetical protein. (714 aa)
AL1_30600Outer membrane receptor proteins, mostly Fe transport. (759 aa)
AL1_30680SusD family. (600 aa)
AL1_31030SusD family. (472 aa)
AL1_31040TonB-dependent starch-binding outer membrane protein SusC; Secretin and TonB N terminus short domain./TonB-dependent Receptor Plug Domain./TonB dependent receptor. (1135 aa)
AL1_31550OmpA family. (389 aa)
AL1_31710SusD family. (458 aa)
AL1_32240Outer membrane receptor for ferrienterochelin and colicins. (1095 aa)
AL1_32400Secretin and TonB N terminus short domain./TonB-dependent Receptor Plug Domain. (1110 aa)
AL1_32410SusD family. (513 aa)
AL1_32710SusD family. (559 aa)
AL1_32720TonB-dependent Receptor Plug Domain./TonB dependent receptor. (1106 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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