STRINGSTRING
AL1_04350 AL1_04350 kbl kbl AL1_14360 AL1_14360 AL1_14040 AL1_14040 AL1_13890 AL1_13890 AL1_13780 AL1_13780 AL1_13770 AL1_13770 AL1_13740 AL1_13740 cysQ cysQ AL1_13010 AL1_13010 AL1_12450 AL1_12450 AL1_11750 AL1_11750 AL1_00260 AL1_00260 AL1_32220 AL1_32220 pfkA pfkA AL1_31780 AL1_31780 pepT pepT AL1_30460 AL1_30460 AL1_30380 AL1_30380 AL1_30250 AL1_30250 AL1_30240 AL1_30240 AL1_29880 AL1_29880 lon lon ftsH ftsH AL1_29030 AL1_29030 AL1_28230 AL1_28230 AL1_28090 AL1_28090 AL1_27800 AL1_27800 AL1_26240 AL1_26240 AL1_26000 AL1_26000 AL1_25850 AL1_25850 AL1_24520 AL1_24520 gcvH gcvH eno eno AL1_22930 AL1_22930 AL1_22920 AL1_22920 AL1_22480 AL1_22480 AL1_22100 AL1_22100 AL1_22030 AL1_22030 pgi pgi gcvT gcvT AL1_19960 AL1_19960 AL1_19380 AL1_19380 AL1_18900 AL1_18900 tpiA tpiA AL1_17710 AL1_17710 AL1_17650 AL1_17650 surE surE AL1_17020 AL1_17020 AL1_16960 AL1_16960 AL1_16910 AL1_16910 AL1_16890 AL1_16890 AL1_16690 AL1_16690 AL1_16630 AL1_16630 rnhB rnhB AL1_16170 AL1_16170 AL1_16030 AL1_16030 AL1_15910 AL1_15910 AL1_15890 AL1_15890 AL1_15860 AL1_15860 AL1_15810 AL1_15810 AL1_15800 AL1_15800 AL1_11640 AL1_11640 AL1_11530 AL1_11530 uxuA uxuA AL1_10960 AL1_10960 AL1_10850 AL1_10850 pnp pnp AL1_10710 AL1_10710 AL1_10500 AL1_10500 AL1_08700 AL1_08700 AL1_08220 AL1_08220 AL1_08200 AL1_08200 nagB nagB AL1_08010 AL1_08010 AL1_07890 AL1_07890 AL1_06960 AL1_06960 AL1_06580 AL1_06580 gpmA gpmA AL1_05730 AL1_05730 AL1_05720 AL1_05720 AL1_05630 AL1_05630 AL1_05090 AL1_05090 hutI hutI AL1_04590 AL1_04590 hutU hutU AL1_04570 AL1_04570 pgk pgk AL1_04340 AL1_04340 gpmI gpmI AL1_03080 AL1_03080 AL1_02800 AL1_02800 AL1_02790 AL1_02790 uxaC uxaC AL1_02170 AL1_02170 AL1_02050 AL1_02050 AL1_01890 AL1_01890 AL1_01270 AL1_01270 AL1_01260 AL1_01260 AL1_01210 AL1_01210 kduI kduI AL1_00540 AL1_00540 AL1_00530 AL1_00530 AL1_00520 AL1_00520 AL1_00330 AL1_00330
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AL1_04350Hypothetical protein. (92 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (395 aa)
AL1_14360Predicted Zn-dependent hydrolases of the beta-lactamase fold. (240 aa)
AL1_14040Pyruvate kinase; Belongs to the pyruvate kinase family. (491 aa)
AL1_13890Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (588 aa)
AL1_13780Beta-glucosidase-related glycosidases. (762 aa)
AL1_13770Beta-glucosidase. (776 aa)
AL1_13740Beta-glucosidase-related glycosidases. (744 aa)
cysQ3'(2'),5'-bisphosphate nucleotidase, bacterial; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (281 aa)
AL1_13010Uncharacterized conserved protein; Belongs to the UPF0597 family. (428 aa)
AL1_12450Beta-galactosidase/beta-glucuronidase. (432 aa)
AL1_11750Pectate lyase. (606 aa)
AL1_00260TonB-dependent Receptor Plug Domain./TonB dependent receptor. (1091 aa)
AL1_32220Hypothetical protein. (330 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (326 aa)
AL1_31780Predicted esterase of the alpha-beta hydrolase superfamily. (282 aa)
pepTPeptidase T. Metallo peptidase. MEROPS family M20B; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (405 aa)
AL1_30460MazG nucleotide pyrophosphohydrolase domain. (108 aa)
AL1_30380Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein. (230 aa)
AL1_30250Hypothetical protein. (589 aa)
AL1_30240Hypothetical protein. (268 aa)
AL1_29880N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. (269 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (809 aa)
ftsHATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (693 aa)
AL1_29030Glycosyl hydrolases family 18. (521 aa)
AL1_28230L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. (368 aa)
AL1_28090Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (606 aa)
AL1_27800Predicted pyrophosphatase. (106 aa)
AL1_26240N-acetylmuramoyl-L-alanine amidase. (390 aa)
AL1_26000Hydrogenase 4 membrane component (E). (209 aa)
AL1_25850Outer membrane receptor proteins, mostly Fe transport. (1064 aa)
AL1_24520Hypothetical protein. (151 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (125 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (433 aa)
AL1_22930L-lysine 2,3-aminomutase. (699 aa)
AL1_22920Beta-galactosidase/beta-glucuronidase. (1035 aa)
AL1_224805'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family. (478 aa)
AL1_22100Endoribonuclease L-PSP. (124 aa)
AL1_22030Fructose-bisphosphate aldolase. (333 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (444 aa)
gcvTAminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. (366 aa)
AL1_19960Ribulose-5-phosphate 3-epimerase. (208 aa)
AL1_19380Glycosyl hydrolases family 18. (533 aa)
AL1_18900Protein of unknown function (DUF2874). (166 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (252 aa)
AL1_17710Esterase/lipase. (278 aa)
AL1_17650Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.; Belongs to the XseB family. (62 aa)
surE5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (273 aa)
AL1_17020Cytidine deaminase. (151 aa)
AL1_16960Zn-dependent hydrolases, including glyoxylases. (222 aa)
AL1_169102-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (211 aa)
AL1_16890Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (661 aa)
AL1_16690NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (460 aa)
AL1_16630Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (724 aa)
rnhBRNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (199 aa)
AL1_16170Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (193 aa)
AL1_16030Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (698 aa)
AL1_15910Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family. (733 aa)
AL1_15890Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (905 aa)
AL1_15860Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (597 aa)
AL1_15810Hypothetical protein. (518 aa)
AL1_15800Hypothetical protein. (419 aa)
AL1_11640Beta-glucosidase-related glycosidases. (701 aa)
AL1_11530Hypothetical protein. (278 aa)
uxuAD-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (392 aa)
AL1_10960Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (677 aa)
AL1_10850Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (293 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (747 aa)
AL1_10710Glycogen debranching enzyme. (669 aa)
AL1_10500Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (621 aa)
AL1_08700Glycosyl hydrolases family 18. (487 aa)
AL1_08220Lyase, catalytic./Polysaccharide lyase family 8, super-sandwich domain./Lyase, N terminal; Broad-specificity glycosaminoglycan lyase. (1010 aa)
AL1_08200Lyase, catalytic./Polysaccharide lyase family 8, super-sandwich domain./Lyase, N terminal; Broad-specificity glycosaminoglycan lyase. (983 aa)
nagBGlucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. (266 aa)
AL1_08010Hypothetical protein. (562 aa)
AL1_07890Trehalose synthase. (559 aa)
AL1_06960Conserved hypothetical protein TIGR00255. (286 aa)
AL1_06580Fructose-bisphosphate aldolase. (350 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (248 aa)
AL1_05730Hypothetical protein. (247 aa)
AL1_05720Hypothetical protein. (493 aa)
AL1_05630Hypothetical protein. (311 aa)
AL1_05090Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family. (260 aa)
hutIImidazolonepropionase. (414 aa)
AL1_04590Histidine ammonia-lyase. (493 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (679 aa)
AL1_04570Glutamate formiminotransferase. (566 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (420 aa)
AL1_04340Fibronectin type III domain. (904 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa)
AL1_030806-phosphofructokinase. (411 aa)
AL1_02800D-altronate dehydratase. (496 aa)
AL1_02790Mannitol-1-phosphate/altronate dehydrogenases. (485 aa)
uxaCD-glucuronate isomerase. (470 aa)
AL1_02170Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family. (770 aa)
AL1_02050Diaminopimelate decarboxylase. (464 aa)
AL1_01890Hypothetical protein. (381 aa)
AL1_01270Heparinase II/III-like protein. (289 aa)
AL1_01260Heparinase II/III-like protein. (667 aa)
AL1_01210Heparinase II/III-like protein. (964 aa)
kduI5-keto 4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (280 aa)
AL1_00540SusD family. (552 aa)
AL1_00530Hypothetical protein. (604 aa)
AL1_00520Glycosidases. (772 aa)
AL1_00330Outer membrane receptor proteins, mostly Fe transport. (1013 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
Server load: low (18%) [HD]