STRINGSTRING
hisD hisD rimP rimP AL1_00870 AL1_00870 AL1_00980 AL1_00980 AL1_01080 AL1_01080 engB engB AL1_02050 AL1_02050 coaE coaE AL1_02350 AL1_02350 AL1_02500 AL1_02500 AL1_02520 AL1_02520 AL1_02720 AL1_02720 AL1_02750 AL1_02750 AL1_02860 AL1_02860 ligA ligA AL1_03080 AL1_03080 AL1_03190 AL1_03190 AL1_04010 AL1_04010 def def AL1_04450 AL1_04450 AL1_04460 AL1_04460 AL1_04480 AL1_04480 AL1_04490 AL1_04490 AL1_04530 AL1_04530 glyA glyA glmS glmS AL1_05130 AL1_05130 AL1_05290 AL1_05290 AL1_05770 AL1_05770 miaA miaA AL1_06580 AL1_06580 AL1_06940 AL1_06940 AL1_06960 AL1_06960 AL1_07480 AL1_07480 AL1_07490 AL1_07490 AL1_07970 AL1_07970 AL1_08080 AL1_08080 nagB nagB AL1_08130 AL1_08130 AL1_08260 AL1_08260 cutC cutC AL1_32200 AL1_32200 AL1_10420 AL1_10420 AL1_10540 AL1_10540 AL1_10610 AL1_10610 rpsO rpsO AL1_10900 AL1_10900 trmH trmH ispG ispG AL1_11110 AL1_11110 AL1_11570 AL1_11570 panB panB guaA guaA tmk tmk AL1_11910 AL1_11910 AL1_12290 AL1_12290 AL1_12360 AL1_12360 AL1_12440 AL1_12440 AL1_12470 AL1_12470 AL1_13100 AL1_13100 glyQS glyQS def-2 def-2 mnmA mnmA rimM rimM aroC aroC aroA aroA cysQ cysQ aroQ aroQ AL1_14090 AL1_14090 proA proA proB proB pyrG pyrG AL1_14250 AL1_14250 cmk cmk ispH ispH AL1_14960 AL1_14960 AL1_14980 AL1_14980 rlmN rlmN tgt tgt AL1_15100 AL1_15100 AL1_15310 AL1_15310 kbl kbl AL1_15540 AL1_15540 rsmH rsmH polA polA AL1_16120 AL1_16120 folE folE AL1_16170 AL1_16170 lipA lipA AL1_16990 AL1_16990 AL1_17020 AL1_17020 AL1_17030 AL1_17030 AL1_17270 AL1_17270 queA queA truB truB AL1_17570 AL1_17570 AL1_17690 AL1_17690 prfA prfA rpsG rpsG rpsC rpsC rpsQ rpsQ rplE rplE AL1_17940 AL1_17940 rpsE rpsE rplO rplO AL1_18090 AL1_18090 AL1_18100 AL1_18100 AL1_18240 AL1_18240 AL1_18330 AL1_18330 AL1_18430 AL1_18430 AL1_18470 AL1_18470 AL1_18480 AL1_18480 AL1_18590 AL1_18590 AL1_18610 AL1_18610 AL1_18760 AL1_18760 AL1_19210 AL1_19210 galK galK AL1_19930 AL1_19930 AL1_20000 AL1_20000 AL1_20100 AL1_20100 ruvB ruvB AL1_20170 AL1_20170 AL1_20180 AL1_20180 AL1_20190 AL1_20190 AL1_20940 AL1_20940 AL1_20950 AL1_20950 ispD ispD AL1_21410 AL1_21410 rimO rimO AL1_21570 AL1_21570 pgi pgi AL1_21780 AL1_21780 AL1_21790 AL1_21790 AL1_21800 AL1_21800 pdxJ pdxJ nadK nadK AL1_21880 AL1_21880 AL1_21970 AL1_21970 AL1_22110 AL1_22110 AL1_22190 AL1_22190 clpB clpB thrS thrS AL1_22350 AL1_22350 AL1_22480 AL1_22480 AL1_22960 AL1_22960 queA-2 queA-2 eno eno groL groL greA greA AL1_23200 AL1_23200 AL1_23220 AL1_23220 asd asd AL1_24020 AL1_24020 AL1_24190 AL1_24190 AL1_24380 AL1_24380 AL1_24780 AL1_24780 AL1_24820 AL1_24820 murB murB AL1_25310 AL1_25310 AL1_25320 AL1_25320 clpX clpX AL1_25370 AL1_25370 metK metK AL1_25540 AL1_25540 aspS aspS tadA tadA AL1_25720 AL1_25720 AL1_25920 AL1_25920 AL1_26050 AL1_26050 AL1_26060 AL1_26060 AL1_26390 AL1_26390 AL1_26550 AL1_26550 AL1_26830 AL1_26830 tdk tdk AL1_27600 AL1_27600 dapB dapB AL1_27790 AL1_27790 argS argS mgsA mgsA leuD leuD AL1_28210 AL1_28210 AL1_28230 AL1_28230 AL1_28250 AL1_28250 AL1_28410 AL1_28410 AL1_28680 AL1_28680 AL1_28840 AL1_28840 AL1_28880 AL1_28880 AL1_29120 AL1_29120 AL1_29130 AL1_29130 panC panC panD panD AL1_29680 AL1_29680 kdsB kdsB AL1_29880 AL1_29880 AL1_29960 AL1_29960 AL1_30160 AL1_30160 AL1_30290 AL1_30290 murF murF folD folD purN purN purM purM purC purC AL1_30780 AL1_30780 purK purK purE purE AL1_30850 AL1_30850 pyrF pyrF AL1_30920 AL1_30920 AL1_30960 AL1_30960 AL1_31600 AL1_31600 AL1_31610 AL1_31610 AL1_31860 AL1_31860 pfkA pfkA hisB hisB AL1_31900 AL1_31900 nusG nusG AL1_00590 AL1_00590 nusA nusA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (431 aa)
rimPUncharacterized protein conserved in bacteria; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. (155 aa)
AL1_00870Xylose isomerase-like TIM barrel. (286 aa)
AL1_00980Dioxygenases related to 2-nitropropane dioxygenase. (359 aa)
AL1_01080Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (169 aa)
engBRibosome biogenesis GTP-binding protein YsxC/EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (198 aa)
AL1_02050Diaminopimelate decarboxylase. (464 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (197 aa)
AL1_02350Dihydropteroate synthase. (271 aa)
AL1_02500Hypothetical protein. (291 aa)
AL1_02520Hypothetical protein. (129 aa)
AL1_02720Sugar kinases, ribokinase family. (348 aa)
AL1_02750Sugar kinases, ribokinase family. (330 aa)
AL1_02860Pseudouridine synthase family; Belongs to the pseudouridine synthase RsuA family. (455 aa)
ligADNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (674 aa)
AL1_030806-phosphofructokinase. (411 aa)
AL1_03190Glutamate decarboxylase; Belongs to the group II decarboxylase family. (471 aa)
AL1_04010Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. (245 aa)
defPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (202 aa)
AL1_04450ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (163 aa)
AL1_04460dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (352 aa)
AL1_04480dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (187 aa)
AL1_04490Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (294 aa)
AL1_04530Carboxynorspermidine dehydrogenase. (396 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (426 aa)
glmSGlutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (614 aa)
AL1_05130Uridine phosphorylase. (292 aa)
AL1_05290Shikimate dehydrogenase. (245 aa)
AL1_05770Flavodoxins. (184 aa)
miaAtRNA isopentenyltransferase (miaA); Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (301 aa)
AL1_06580Fructose-bisphosphate aldolase. (350 aa)
AL1_06940D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (333 aa)
AL1_06960Conserved hypothetical protein TIGR00255. (286 aa)
AL1_07480HipA-like C-terminal domain./HipA-like N-terminal domain. (313 aa)
AL1_07490HipA N-terminal domain. (110 aa)
AL1_07970Sugar phosphate isomerases/epimerases. (288 aa)
AL1_08080[Acyl-carrier-protein] S-malonyltransferase. (293 aa)
nagBGlucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. (266 aa)
AL1_081306-phosphogluconolactonase/Glucosamine-6- phosphateisomerase/deaminase. (649 aa)
AL1_08260Mannose-6-phosphate isomerase, type 1. (321 aa)
cutCUncharacterized protein involved in copper resistance; Participates in the control of copper homeostasis. Belongs to the CutC family. (243 aa)
AL1_32200Sugar phosphate isomerases/epimerases. (283 aa)
AL1_10420Formate acetyltransferase 1. (742 aa)
AL1_105407-keto-8-aminopelargonate synthetase and related enzymes. (423 aa)
AL1_10610Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family. (253 aa)
rpsOSSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (90 aa)
AL1_10900Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (397 aa)
trmHrRNA methylases; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (243 aa)
ispG1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (494 aa)
AL1_11110Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (464 aa)
AL1_11570rRNA methylases. (178 aa)
panBKetopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (254 aa)
guaAGMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. (508 aa)
tmkThymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (228 aa)
AL1_11910Predicted redox protein, regulator of disulfide bond formation. (127 aa)
AL1_12290Aminoacyl-histidine dipeptidase. (485 aa)
AL1_12360Catalase; Belongs to the catalase family. (497 aa)
AL1_12440Hypothetical protein. (150 aa)
AL1_12470ORF6N domain. (179 aa)
AL1_131003-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (415 aa)
glyQSglycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (514 aa)
def-2Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (181 aa)
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (399 aa)
rimM16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (187 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (325 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (414 aa)
cysQ3'(2'),5'-bisphosphate nucleotidase, bacterial; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (281 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (142 aa)
AL1_14090Phosphotransacetylase. (302 aa)
proAGlutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (416 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (364 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (539 aa)
AL1_14250SAM-dependent methyltransferase. (399 aa)
cmkCytidylate kinase. (233 aa)
ispH(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (294 aa)
AL1_14960Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (298 aa)
AL1_14980Uracil phosphoribosyltransferase. (218 aa)
rlmN23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (342 aa)
tgttRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] (376 aa)
AL1_15100Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (361 aa)
AL1_153103-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. (181 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (395 aa)
AL1_15540Heat shock protein Hsp15. (131 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (300 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (958 aa)
AL1_16120Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (334 aa)
folEGTP cyclohydrolase I. (202 aa)
AL1_16170Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (193 aa)
lipALipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (293 aa)
AL1_1699023S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (469 aa)
AL1_17020Cytidine deaminase. (151 aa)
AL1_17030Ribosomal large subunit pseudouridine synthase D. (228 aa)
AL1_17270Glycogen synthase (UDP-glucose). (268 aa)
queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (336 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (238 aa)
AL1_17570Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (376 aa)
AL1_17690O(6)-alkylguanine repair protein YbaZ. (100 aa)
prfABacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (361 aa)
rpsGSSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (158 aa)
rpsCSSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (262 aa)
rpsQSSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa)
rplELSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (167 aa)
AL1_17940SSU ribosomal protein S8P; Belongs to the universal ribosomal protein uS8 family. (99 aa)
rpsESSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (172 aa)
rplOLSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (148 aa)
AL1_18090Acyl dehydratase. (154 aa)
AL1_18100Histidinol phosphatase and related hydrolases of the PHP family. (396 aa)
AL1_18240Multimeric flavodoxin WrbA. (204 aa)
AL1_18330dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes. (144 aa)
AL1_18430Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
AL1_18470Hypothetical protein. (370 aa)
AL1_18480Transcription antiterminator. (374 aa)
AL1_18590Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (301 aa)
AL1_18610dTDP-D-glucose 4,6-dehydratase. (175 aa)
AL1_18760Hypothetical protein. (67 aa)
AL1_19210Ribosomal subunit interface protein. (98 aa)
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (375 aa)
AL1_19930rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (246 aa)
AL1_20000Inactive homolog of metal-dependent proteases, putative molecular chaperone. (235 aa)
AL1_20100Riboflavin synthase, alpha subunit. (198 aa)
ruvBHolliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (335 aa)
AL1_20170Malic enzyme. (426 aa)
AL1_201803-dehydroquinate synthetase. (233 aa)
AL1_201903-dehydroquinate synthetase. (107 aa)
AL1_20940Cysteine desulfuration protein SufE. (139 aa)
AL1_20950Predicted metal-sulfur cluster biosynthetic enzyme. (106 aa)
ispD2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (245 aa)
AL1_214104-phosphoerythronate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. (331 aa)
rimOSSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (432 aa)
AL1_21570HD domain. (207 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (444 aa)
AL1_21780Conserved hypothetical protein TIGR01033. (229 aa)
AL1_21790Lactoylglutathione lyase and related lyases. (126 aa)
AL1_21800Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family. (193 aa)
pdxJPyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. (238 aa)
nadKPredicted sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (292 aa)
AL1_21880Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (237 aa)
AL1_21970Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (266 aa)
AL1_22110Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (850 aa)
AL1_22190Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (117 aa)
clpBATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (865 aa)
thrSthreonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase; Belongs to the class-II aminoacyl-tRNA synthetase family. (604 aa)
AL1_22350rRNA methylases. (251 aa)
AL1_224805'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family. (478 aa)
AL1_22960L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (519 aa)
queA-2S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (403 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (433 aa)
groLChaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (543 aa)
greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (158 aa)
AL1_23200Tetrahydrodipicolinate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (275 aa)
AL1_23220Aspartate kinase; Belongs to the aspartokinase family. (418 aa)
asdAspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (330 aa)
AL1_24020Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (448 aa)
AL1_24190Predicted metal-binding, possibly nucleic acid-binding protein. (201 aa)
AL1_24380Uncharacterized protein related to capsule biosynthesis enzymes. (496 aa)
AL1_24780Acetyl-CoA hydrolase. (431 aa)
AL1_24820Transcriptional regulators. (234 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (335 aa)
AL1_253105,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (318 aa)
AL1_25320Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1204 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (422 aa)
AL1_25370Transketolase; Belongs to the transketolase family. (656 aa)
metKMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (436 aa)
AL1_25540Phosphoesterase, MJ0936 family. (164 aa)
aspSaspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (584 aa)
tadACytosine/adenosine deaminases; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (148 aa)
AL1_25720Sugar kinases, ribokinase family. (318 aa)
AL1_25920Predicted SAM-dependent methyltransferases. (311 aa)
AL1_26050Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. (710 aa)
AL1_26060Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. (693 aa)
AL1_26390Conserved hypothetical protein. (131 aa)
AL1_26550Hypothetical protein. (588 aa)
AL1_26830L-serine ammonia-lyase. (380 aa)
tdkThymidine kinase. (191 aa)
AL1_27600Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (154 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (253 aa)
AL1_27790Predicted O-methyltransferase. (215 aa)
argSarginyl-tRNA synthetase. (593 aa)
mgsAMethylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (162 aa)
leuD3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (197 aa)
AL1_282103-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (458 aa)
AL1_28230L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. (368 aa)
AL1_28250Aminoacyl-histidine dipeptidase. (483 aa)
AL1_28410Predicted flavoproteins. (423 aa)
AL1_28680Bacterioferritin (cytochrome b1). (208 aa)
AL1_28840Translation factor SUA5; Belongs to the SUA5 family. (200 aa)
AL1_28880Uncharacterized conserved protein. (91 aa)
AL1_29120ORF6N domain. (194 aa)
AL1_29130ORF6N domain. (187 aa)
panCPantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (279 aa)
panDL-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (119 aa)
AL1_29680tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (376 aa)
kdsB3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (254 aa)
AL1_29880N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. (269 aa)
AL1_29960Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family. (380 aa)
AL1_30160Mismatch repair ATPase (MutS family). (526 aa)
AL1_30290Hypothetical protein. (557 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (417 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (285 aa)
purNFormyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (186 aa)
purMPhosphoribosylformylglycinamidine cyclo-ligase. (341 aa)
purCPhosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. (238 aa)
AL1_30780Phosphoribosylformylglycinamidine synthase. (1239 aa)
purKPhosphoribosylaminoimidazole carboxylase, PurK protein; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (363 aa)
purE5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (155 aa)
AL1_30850Glutaredoxin. (86 aa)
pyrFOrotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (234 aa)
AL1_30920Transcriptional regulators of sugar metabolism. (257 aa)
AL1_30960Predicted sugar phosphatases of the HAD superfamily. (289 aa)
AL1_31600HipA N-terminal domain. (106 aa)
AL1_31610HipA-like C-terminal domain./HipA-like N-terminal domain. (336 aa)
AL1_31860Transcriptional regulator, PadR family. (111 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (326 aa)
hisBImidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. In the N-terminal section; belongs to the histidinol- phosphatase family. (375 aa)
AL1_31900Sugar kinases, ribokinase family; Belongs to the carbohydrate kinase PfkB family. (333 aa)
nusGTranscription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. (186 aa)
AL1_005904-alpha-glucanotransferase. (867 aa)
nusATranscription termination factor NusA; Participates in both transcription termination and antitermination. (409 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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