STRINGSTRING
AL1_04460 AL1_04460 AL1_04470 AL1_04470 AL1_04480 AL1_04480 AL1_04490 AL1_04490 AL1_05120 AL1_05120 AL1_08260 AL1_08260 AL1_18330 AL1_18330 AL1_18340 AL1_18340 AL1_18350 AL1_18350 AL1_18430 AL1_18430 AL1_18440 AL1_18440 AL1_18590 AL1_18590 AL1_18610 AL1_18610 AL1_26410 AL1_26410 AL1_30410 AL1_30410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AL1_04460dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (352 aa)
AL1_04470dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (286 aa)
AL1_04480dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (187 aa)
AL1_04490Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (294 aa)
AL1_05120Phosphomannomutase. (462 aa)
AL1_08260Mannose-6-phosphate isomerase, type 1. (321 aa)
AL1_18330dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes. (144 aa)
AL1_18340CDP-glucose 4,6-dehydratase. (318 aa)
AL1_18350Glucose-1-phosphate cytidylyltransferase. (232 aa)
AL1_18430Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
AL1_18440Nucleoside-diphosphate-sugar epimerases. (324 aa)
AL1_18590Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (301 aa)
AL1_18610dTDP-D-glucose 4,6-dehydratase. (175 aa)
AL1_26410Nucleotide sugar dehydrogenase. (438 aa)
AL1_30410Mannose-1-phosphate guanylyltransferase (GDP). (348 aa)
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
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