STRINGSTRING
EC1_00220 EC1_00220 dacA dacA EC1_00260 EC1_00260 EC1_00320 EC1_00320 EC1_00330 EC1_00330 EC1_00410 EC1_00410 EC1_00430 EC1_00430 EC1_00570 EC1_00570 EC1_01380 EC1_01380 EC1_01650 EC1_01650 EC1_01850 EC1_01850 EC1_02190 EC1_02190 EC1_02200 EC1_02200 EC1_02210 EC1_02210 EC1_02220 EC1_02220 EC1_02270 EC1_02270 EC1_02340 EC1_02340 murD murD mraY mraY EC1_02660 EC1_02660 EC1_02900 EC1_02900 EC1_03090 EC1_03090 EC1_03100 EC1_03100 sigA sigA EC1_03860 EC1_03860 murF murF ddl ddl EC1_04130 EC1_04130 EC1_04140 EC1_04140 EC1_04170 EC1_04170 EC1_07550 EC1_07550 EC1_07780 EC1_07780 EC1_07790 EC1_07790 EC1_07800 EC1_07800 EC1_08060 EC1_08060 EC1_08070 EC1_08070 EC1_08080 EC1_08080 rsmA rsmA EC1_08610 EC1_08610 EC1_09430 EC1_09430 EC1_10580 EC1_10580 EC1_10950 EC1_10950 EC1_11070 EC1_11070 EC1_11080 EC1_11080 EC1_11170 EC1_11170 EC1_11180 EC1_11180 EC1_11190 EC1_11190 EC1_11200 EC1_11200 EC1_11350 EC1_11350 EC1_11360 EC1_11360 EC1_11370 EC1_11370 EC1_11430 EC1_11430 EC1_12510 EC1_12510 EC1_12760 EC1_12760 EC1_12770 EC1_12770 EC1_12780 EC1_12780 EC1_13020 EC1_13020 EC1_13210 EC1_13210 EC1_13570 EC1_13570 EC1_13930 EC1_13930 EC1_14030 EC1_14030 EC1_14040 EC1_14040 EC1_14540 EC1_14540 EC1_14550 EC1_14550 EC1_14570 EC1_14570 EC1_14680 EC1_14680 EC1_15510 EC1_15510 EC1_15520 EC1_15520 EC1_15620 EC1_15620 EC1_15630 EC1_15630 EC1_15640 EC1_15640 EC1_15660 EC1_15660 miaB miaB EC1_15680 EC1_15680 EC1_15960 EC1_15960 EC1_16080 EC1_16080 EC1_16090 EC1_16090 EC1_17380 EC1_17380 EC1_17390 EC1_17390 def def EC1_17430 EC1_17430 EC1_17470 EC1_17470 recU recU EC1_17670 EC1_17670 EC1_17680 EC1_17680 EC1_18390 EC1_18390 EC1_18600 EC1_18600 EC1_18610 EC1_18610 EC1_18620 EC1_18620 EC1_18650 EC1_18650 ftsE ftsE EC1_18670 EC1_18670 EC1_18680 EC1_18680 murB murB EC1_20390 EC1_20390 EC1_20400 EC1_20400 nnrD nnrD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EC1_00220YbbR-like protein. (255 aa)
dacAConserved hypothetical protein TIGR00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (307 aa)
EC1_00260Response regulator of the LytR/AlgR family. (227 aa)
EC1_00320DNA replication protein. (298 aa)
EC1_00330DnaD and phage-associated domain. (382 aa)
EC1_00410Rod shape-determining protein MreC. (255 aa)
EC1_00430Hypothetical protein. (135 aa)
EC1_00570Uncharacterized protein conserved in bacteria. (107 aa)
EC1_01380Cystathionine beta-lyase family protein involved in aluminum resistance. (416 aa)
EC1_01650Uncharacterized protein conserved in bacteria. (153 aa)
EC1_01850FOG: Ankyrin repeat. (223 aa)
EC1_02190Hypothetical protein. (93 aa)
EC1_02200Domain of unknown function(DUF2779). (459 aa)
EC1_02210Predicted transcriptional regulator. (314 aa)
EC1_02220Predicted permease. (392 aa)
EC1_02270Conserved hypothetical protein; Belongs to the ArsC family. (154 aa)
EC1_02340Uncharacterized bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP); Belongs to the UppP family. (106 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (436 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (326 aa)
EC1_02660Hypothetical protein. (282 aa)
EC1_02900Predicted acyltransferase. (144 aa)
EC1_03090Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. (654 aa)
EC1_03100Hypothetical protein. (274 aa)
sigARNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (368 aa)
EC1_03860Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. (245 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (453 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (347 aa)
EC1_04130Uncharacterized protein conserved in bacteria. (338 aa)
EC1_04140Hypothetical protein. (63 aa)
EC1_04170HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. (174 aa)
EC1_07550NlpC/P60 family. (330 aa)
EC1_07780Hypothetical protein. (125 aa)
EC1_07790Predicted amidophosphoribosyltransferases. (196 aa)
EC1_07800Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein). (385 aa)
EC1_08060UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase. (130 aa)
EC1_08070Actin-like ATPase involved in cell morphogenesis. (308 aa)
EC1_08080Protein of unknown function (DUF1146). (69 aa)
rsmADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (289 aa)
EC1_08610Uncharacterized conserved protein. (213 aa)
EC1_09430Domain of Unknown Function (DUF349). (161 aa)
EC1_10580C_GCAxxG_C_C family probable redox protein. (136 aa)
EC1_10950Leucine Rich Repeat. (480 aa)
EC1_11070PPIC-type PPIASE domain. (339 aa)
EC1_11080Hypothetical protein. (303 aa)
EC1_11170Hypothetical protein. (613 aa)
EC1_11180Protein kinase domain. (470 aa)
EC1_11190FOG: FHA domain. (321 aa)
EC1_11200Hypothetical protein. (183 aa)
EC1_11350Hypothetical protein. (62 aa)
EC1_11360Phosphoesterase, MJ0936 family. (155 aa)
EC1_11370D-alanyl-D-alanine carboxypeptidase. (347 aa)
EC1_11430Ribonuclease HIII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (170 aa)
EC1_12510Membrane proteins related to metalloendopeptidases. (405 aa)
EC1_12760Predicted glutamine amidotransferase. (251 aa)
EC1_12770UDP-N-acetylmuramyl tripeptide synthase. (199 aa)
EC1_12780UDP-N-acetylmuramyl tripeptide synthase. (254 aa)
EC1_13020Predicted hydrolase (metallo-beta-lactamase superfamily). (498 aa)
EC1_13210UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (435 aa)
EC1_13570DNA-directed RNA polymerase, delta subunit. (113 aa)
EC1_13930Uncharacterized protein involved in methicillin resistance. (404 aa)
EC1_14030ADP-ribose pyrophosphatase. (134 aa)
EC1_14040HD superfamily phosphohydrolases. (416 aa)
EC1_14540Hypothetical protein. (207 aa)
EC1_14550Exopolyphosphatase-related proteins. (308 aa)
EC1_14570Uncharacterized protein conserved in bacteria; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. (94 aa)
EC1_14680Negative regulator of septation ring formation. (466 aa)
EC1_15510Transglycosylase. (237 aa)
EC1_15520Uncharacterized protein conserved in bacteria. (71 aa)
EC1_15620ComK protein. (148 aa)
EC1_15630Putative translation initiation inhibitor, yjgF family. (142 aa)
EC1_15640DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. (738 aa)
EC1_15660Predicted hydrolase of the metallo-beta-lactamase superfamily. (566 aa)
miaBtRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (477 aa)
EC1_15680Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I). (57 aa)
EC1_15960Actin-like ATPase involved in cell morphogenesis. (321 aa)
EC1_16080Phosphomannomutase. (190 aa)
EC1_16090Phosphomannomutase. (300 aa)
EC1_17380RNA methyltransferase, RsmD family. (182 aa)
EC1_17390Bacterial cell division membrane protein; Belongs to the SEDS family. (420 aa)
defPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (184 aa)
EC1_17430Predicted membrane protein. (169 aa)
EC1_17470DivIVA domain. (110 aa)
recUPenicillin-binding protein-related factor A, putative recombinase; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. (168 aa)
EC1_17670Transcriptional regulator, MarR family. (148 aa)
EC1_17680NlpC/P60 family. (320 aa)
EC1_18390Cell division protein FtsI/penicillin-binding protein 2. (689 aa)
EC1_18600D-alanyl-D-alanine carboxypeptidase. (300 aa)
EC1_18610Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation). (410 aa)
EC1_18620D-alanyl-D-alanine carboxypeptidase. (397 aa)
EC1_18650Membrane-bound metallopeptidase. (454 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
EC1_18670Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (300 aa)
EC1_18680C-terminal peptidase (prc); Belongs to the peptidase S41A family. (473 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (299 aa)
EC1_20390Membrane protein involved in the export of O-antigen and teichoic acid. (542 aa)
EC1_20400Stress responsive A/B Barrel Domain. (92 aa)
nnrDyjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] (506 aa)
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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