STRINGSTRING
ftsH ftsH EC1_00750 EC1_00750 EC1_01560 EC1_01560 EC1_02340 EC1_02340 EC1_02500 EC1_02500 EC1_02510 EC1_02510 EC1_03070 EC1_03070 EC1_03330 EC1_03330 EC1_03700 EC1_03700 ffh ffh EC1_04220 EC1_04220 EC1_04660 EC1_04660 EC1_04710 EC1_04710 EC1_05150 EC1_05150 EC1_05210 EC1_05210 EC1_06300 EC1_06300 EC1_06790 EC1_06790 EC1_07230 EC1_07230 fusA fusA EC1_07940 EC1_07940 EC1_08180 EC1_08180 EC1_08190 EC1_08190 EC1_10540 EC1_10540 EC1_10550 EC1_10550 obg obg EC1_11710 EC1_11710 EC1_11910 EC1_11910 EC1_12830 EC1_12830 EC1_13090 EC1_13090 era era EC1_13630 EC1_13630 EC1_13640 EC1_13640 ftsY ftsY EC1_14600 EC1_14600 recD2 recD2 uppP uppP ruvA ruvA EC1_16520 EC1_16520 EC1_17160 EC1_17160 uvrB uvrB EC1_19130 EC1_19130 EC1_19390 EC1_19390 EC1_19570 EC1_19570 EC1_19580 EC1_19580 guaA guaA EC1_21130 EC1_21130
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
ftsHMembrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (655 aa)
EC1_00750Recombination protein MgsA. (445 aa)
EC1_01560Predicted pyrophosphatase. (104 aa)
EC1_02340Uncharacterized bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP); Belongs to the UppP family. (106 aa)
EC1_02500Translation-initiation factor 2./Elongation factor Tu domain 2. (214 aa)
EC1_02510Small GTP-binding protein domain; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. (413 aa)
EC1_03070Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (448 aa)
EC1_03330Superfamily I DNA and RNA helicases. (564 aa)
EC1_03700Predicted nucleotide kinase. (162 aa)
ffhSignal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (471 aa)
EC1_04220ATPases involved in chromosome partitioning. (261 aa)
EC1_04660Small GTP-binding protein domain. (639 aa)
EC1_04710dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. (108 aa)
EC1_05150Hypothetical protein. (78 aa)
EC1_05210Inorganic pyrophosphatase/exopolyphosphatase. (545 aa)
EC1_06300ATPases involved in chromosome partitioning. (272 aa)
EC1_06790ATPases involved in chromosome partitioning. (282 aa)
EC1_07230GTPases-translation elongation factors. (45 aa)
fusATranslation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] (699 aa)
EC1_07940Inorganic pyrophosphatase. (130 aa)
EC1_08180ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. (492 aa)
EC1_08190ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); ATP-dependent DNA helicase. (558 aa)
EC1_10540Molecular chaperone, HSP90 family. (427 aa)
EC1_10550Molecular chaperone, HSP90 family. (198 aa)
obgObg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (427 aa)
EC1_11710RecG-like helicase. (497 aa)
EC1_11910Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (168 aa)
EC1_12830ATPases involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (278 aa)
EC1_13090Membrane GTPase LepA. (288 aa)
eraGTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (300 aa)
EC1_13630DNA mismatch repair enzyme (predicted ATPase). (370 aa)
EC1_13640DNA mismatch repair enzyme (predicted ATPase); Belongs to the DNA mismatch repair MutL/HexB family. (251 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (321 aa)
EC1_14600SMC proteins Flexible Hinge Domain./RecF/RecN/SMC N terminal domain. (526 aa)
recD2Helicase, putative, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (715 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (273 aa)
ruvAHolliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (193 aa)
EC1_16520ATPase, P-type (transporting), HAD superfamily, subfamily IC. (521 aa)
EC1_17160Hydrogenase accessory protein HypB. (221 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (655 aa)
EC1_19130Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. (622 aa)
EC1_19390ATPase family associated with various cellular activities (AAA). (490 aa)
EC1_19570Nucleotide-binding protein implicated in inhibition of septum formation; Belongs to the Maf family. (125 aa)
EC1_19580Nucleotide-binding protein implicated in inhibition of septum formation. (46 aa)
guaAGMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. (515 aa)
EC1_21130Predicted membrane protein. (283 aa)
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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