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| | FP2_28780 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (327 aa) |
| | FP2_28790 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily. (318 aa) |
| | FP2_28940 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. (277 aa) |
| | FP2_28970 | Hypothetical protein. (706 aa) |
| | FP2_29060 | Glycerate 2-kinase. (411 aa) |
| | FP2_29170 | Predicted Zn-dependent peptidases, insulinase-like. (918 aa) |
| | FP2_30180 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. (663 aa) |
| | FP2_30270 | Hypothetical protein. (125 aa) |
| | FP2_30300 | Exopolyphosphatase-related proteins. (327 aa) |
| | FP2_28660 | Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (404 aa) |
| | FP2_30320 | Riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family. (305 aa) |
| | rpsO | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (84 aa) |
| | FP2_30400 | O-acetylhomoserine sulfhydrolase. (424 aa) |
| | FP2_31110 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily. (365 aa) |
| | FP2_31300 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (294 aa) |
| | FP2_31550 | Nucleoside-diphosphate-sugar epimerases. (343 aa) |
| | FP2_31580 | Hypothetical protein. (188 aa) |
| | FP2_31980 | Predicted transcriptional regulators. (233 aa) |
| | FP2_32070 | Thioredoxin; Belongs to the thioredoxin family. (102 aa) |
| | FP2_32130 | Transketolase, N-terminal subunit. (283 aa) |
| | FP2_32260 | Phosphotransferase system IIB components. (143 aa) |
| | FP2_32320 | Predicted esterase of the alpha-beta hydrolase superfamily. (390 aa) |
| | fhs | Formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (553 aa) |
| | rpmF | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. (59 aa) |
| | FP2_02700 | Endoribonuclease L-PSP. (122 aa) |
| | FP2_02980 | AAA domain (dynein-related subfamily). (315 aa) |
| | FP2_03070 | Rad3-related DNA helicases. (849 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa) |
| | FP2_03180 | Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (112 aa) |
| | FP2_03290 | Helicase conserved C-terminal domain. (1006 aa) |
| | FP2_03370 | DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (263 aa) |
| | FP2_03470 | Type II intron maturase. (261 aa) |
| | FP2_03660 | Hypothetical protein. (83 aa) |
| | FP2_03970 | Iron-regulated ABC transporter ATPase subunit SufC. (252 aa) |
| | FP2_03980 | Iron-regulated ABC transporter membrane component SufB. (472 aa) |
| | FP2_03990 | ABC-type transport system involved in Fe-S cluster assembly, permease component. (360 aa) |
| | FP2_04590 | DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (241 aa) |
| | FP2_04660 | Phage DNA replication protein (predicted replicative helicase loader). (280 aa) |
| | FP2_04670 | Replication initiator protein A (RepA) N-terminus. (264 aa) |
| | rpsF | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. (94 aa) |
| | rpsR | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (85 aa) |
| | FP2_05450 | Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (535 aa) |
| | FP2_05610 | FOG: CBS domain. (157 aa) |
| | FP2_05620 | Hypothetical protein. (508 aa) |
| | rplU | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | rpmA | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. (83 aa) |
| | mrnC | Uncharacterized protein conserved in bacteria; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (134 aa) |
| | FP2_05860 | Uncharacterized protein conserved in bacteria. (559 aa) |
| | FP2_05890 | Uncharacterized protein conserved in bacteria. (252 aa) |
| | rpmB | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. (62 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (753 aa) |
| | FP2_06160 | Hypothetical protein. (372 aa) |
| | FP2_06250 | Sporulation protein, YlmC/YmxH family. (97 aa) |
| | rpsB | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. (240 aa) |
| | FP2_06750 | DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (244 aa) |
| | FP2_06920 | Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (374 aa) |
| | nth | Predicted EndoIII-related endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (226 aa) |
| | FP2_07110 | Recombination protein MgsA. (424 aa) |
| | FP2_07210 | Uncharacterized conserved protein, contains S4-like domain. (273 aa) |
| | rplS | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (113 aa) |
| | FP2_07350 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (307 aa) |
| | FP2_07750 | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (296 aa) |
| | FP2_07810 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. (555 aa) |
| | recO | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. (248 aa) |
| | ybeY | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (163 aa) |
| | rpmE | LSU ribosomal protein L31P; Binds the 23S rRNA. (66 aa) |
| | FP2_08270 | Ribosomal protein S1. (311 aa) |
| | FP2_08520 | N-terminal phage replisome organiser (Phage_rep_org_N). (73 aa) |
| | FP2_08640 | Sugar kinases, ribokinase family; Belongs to the carbohydrate kinase PfkB family. (310 aa) |
| | FP2_09070 | Replication initiator protein A (RepA) N-terminus. (298 aa) |
| | FP2_09300 | DNA topoisomerase III, bacteria and conjugative plasmid. (691 aa) |
| | FP2_09540 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (339 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (154 aa) |
| | FP2_10050 | Uridine kinase. (311 aa) |
| | FP2_10080 | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (89 aa) |
| | rpsI | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (132 aa) |
| | rplM | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | FP2_10410 | Predicted phosphohydrolases. (287 aa) |
| | FP2_10700 | Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (397 aa) |
| | FP2_10710 | hydroxymethylglutaryl-CoA lyase. (302 aa) |
| | FP2_10900 | Dipeptidase. (527 aa) |
| | FP2_10910 | Uncharacterized protein conserved in bacteria C-term(DUF2220). (412 aa) |
| | FP2_10920 | SMC proteins Flexible Hinge Domain. (1127 aa) |
| | FP2_11270 | Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (590 aa) |
| | FP2_11290 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (397 aa) |
| | FP2_11780 | Replication initiator protein A (RepA) N-terminus. (190 aa) |
| | rpsT | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (86 aa) |
| | FP2_12470 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (648 aa) |
| | FP2_12620 | Predicted transcriptional regulators. (74 aa) |
| | FP2_12630 | Transcriptional regulator, XRE family. (74 aa) |
| | FP2_12660 | Endoribonuclease L-PSP. (124 aa) |
| | FP2_12950 | MutS domain I. (397 aa) |
| | FP2_13010 | Rad3-related DNA helicases. (682 aa) |
| | FP2_13400 | Hypothetical protein. (56 aa) |
| | FP2_13410 | DNA replication protein. (202 aa) |
| | ychF | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (377 aa) |
| | FP2_13560 | Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa) |
| | FP2_13810 | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (548 aa) |
| | FP2_13980 | Sugar kinases, ribokinase family. (322 aa) |
| | FP2_14000 | Phage/plasmid primase, P4 family, C-terminal domain. (439 aa) |
| | FP2_14080 | Hypothetical protein. (286 aa) |
| | udk | Uridine kinase. (209 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa) |
| | rpsJ | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (210 aa) |
| | rplD | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. (207 aa) |
| | rplW | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa) |
| | rplB | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rpsS | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (88 aa) |
| | FP2_14760 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (91 aa) |
| | rpsC | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (234 aa) |
| | rplP | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (146 aa) |
| | rpmC | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (61 aa) |
| | rpsQ | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (85 aa) |
| | rplN | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (181 aa) |
| | rpsZ | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa) |
| | rplL | LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa) |
| | rplJ | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (171 aa) |
| | rplA | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (230 aa) |
| | rplK | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | rpmG | LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family. (49 aa) |
| | rpsU | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. (58 aa) |
| | nadD | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (225 aa) |
| | smc | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1185 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (695 aa) |
| | rplT | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (116 aa) |
| | rpmI | LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family. (67 aa) |
| | FP2_02090 | Conserved hypothetical protein TIGR00250; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (143 aa) |
| | ispE | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (293 aa) |
| | sbcD | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (379 aa) |
| | FP2_01730 | Uncharacterized protein related to glutamine synthetase. (695 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. (434 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (492 aa) |
| | FP2_01000 | DnaD and phage-associated domain. (282 aa) |
| | FP2_00920 | Predicted transcriptional regulators; Belongs to the ParB family. (518 aa) |
| | FP2_00800 | Predicted transcriptional regulators. (227 aa) |
| | FP2_00540 | DNA topoisomerase III, bacteria and conjugative plasmid. (628 aa) |
| | rpsH | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rplF | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (183 aa) |
| | rplR | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa) |
| | rpsE | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa) |
| | FP2_14890 | LSU ribosomal protein L30P. (61 aa) |
| | rplO | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (210 aa) |
| | rpmJ | LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (123 aa) |
| | rpsK | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (136 aa) |
| | rpsD | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (200 aa) |
| | rplQ | LSU ribosomal protein L17P. (113 aa) |
| | FP2_15450 | Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family. (102 aa) |
| | FP2_15460 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (395 aa) |
| | FP2_15480 | Amidohydrolase. (410 aa) |
| | FP2_15570 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (351 aa) |
| | cobB | NAD-dependent protein deacetylases, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (241 aa) |
| | FP2_15830 | Mg2+ transporter (mgtE); Acts as a magnesium transporter. (459 aa) |
| | rnhA | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (154 aa) |
| | FP2_16060 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (465 aa) |
| | FP2_16180 | Flavocytochrome c. (639 aa) |
| | FP2_16200 | RND family efflux transporter, MFP subunit. (541 aa) |
| | FP2_17520 | PTS system, glucose subfamily, IIA component. (699 aa) |
| | FP2_18070 | Carboxynorspermidine decarboxylase. (404 aa) |
| | FP2_18090 | Agmatinase; Belongs to the arginase family. (292 aa) |
| | FP2_18120 | Sugar kinases, ribokinase family. (362 aa) |
| | FP2_18160 | Metal-dependent hydrolases of the beta-lactamase superfamily I. (263 aa) |
| | FP2_18230 | Phage/plasmid primase, P4 family, C-terminal domain. (457 aa) |
| | FP2_18240 | DNA primase (bacterial type). (206 aa) |
| | dnaG | DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (592 aa) |
| | rpsL | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (142 aa) |
| | rpsG | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | FP2_18810 | Cupin domain. (116 aa) |
| | FP2_18870 | DNA replication protein; Belongs to the DnaA family. (326 aa) |
| | FP2_18880 | DnaD and phage-associated domain. (304 aa) |
| | FP2_18920 | Hypothetical protein. (500 aa) |
| | FP2_18940 | Acetyltransferase (GNAT) family. (246 aa) |
| | FP2_19000 | Hypothetical protein. (239 aa) |
| | FP2_19280 | Glutamate synthase domain 2. (1511 aa) |
| | FP2_19340 | Diaminopimelate decarboxylase. (432 aa) |
| | FP2_19380 | DNA repair protein radc. (244 aa) |
| | FP2_19600 | Hypothetical protein. (631 aa) |
| | FP2_19720 | DNA primase (bacterial type). (182 aa) |
| | FP2_19970 | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (174 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (664 aa) |
| | recF | recF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (373 aa) |
| | rpmH | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | FP2_20200 | ParB-like partition proteins; Belongs to the ParB family. (264 aa) |
| | FP2_20230 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. (288 aa) |
| | FP2_20390 | PAP2 superfamily. (219 aa) |
| | FP2_20470 | SMC proteins Flexible Hinge Domain. (1104 aa) |
| | FP2_20550 | Electron transfer flavoprotein, alpha subunit. (364 aa) |
| | FP2_20570 | butyryl-CoA dehydrogenase. (389 aa) |
| | FP2_20580 | 3-hydroxyacyl-CoA dehydrogenase. (290 aa) |
| | FP2_20620 | Acetyl-CoA hydrolase. (448 aa) |
| | FP2_20700 | Uncharacterized protein conserved in bacteria. (675 aa) |
| | FP2_20810 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa) |
| | FP2_21020 | DNA-3-methyladenine glycosylase II. (198 aa) |
| | FP2_21070 | Small primase-like proteins (Toprim domain). (205 aa) |
| | FP2_21150 | Nuclease-related domain./Topoisomerase DNA binding C4 zinc finger. (268 aa) |
| | FP2_21160 | L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases. (340 aa) |
| | FP2_21200 | Adenylate kinase and related kinases. (169 aa) |
| | FP2_21320 | 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase. (283 aa) |
| | FP2_21390 | DNA-binding transcriptional activator of the SARP family. (414 aa) |
| | FP2_21860 | Replication initiator protein A (RepA) N-terminus. (289 aa) |
| | FP2_22400 | Hypothetical protein. (93 aa) |
| | FP2_22550 | ATP-dependent DNA helicase, RecQ family. (525 aa) |
| | truA | Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (251 aa) |
| | FP2_22720 | Reverse transcriptase (RNA-dependent DNA polymerase). (308 aa) |
| | FP2_22860 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (313 aa) |
| | FP2_23220 | Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (405 aa) |
| | FP2_23280 | Sugar kinases, ribokinase family. (341 aa) |
| | FP2_23310 | PAP2 superfamily. (218 aa) |
| | tadA | tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (162 aa) |
| | FP2_23780 | Uncharacterized protein conserved in bacteria. (130 aa) |
| | FP2_23810 | ATPase family associated with various cellular activities (AAA). (515 aa) |
| | FP2_23870 | Deoxycytidylate deaminase. (159 aa) |
| | FP2_23990 | Phage/plasmid primase, P4 family, C-terminal domain. (439 aa) |
| | FP2_24340 | G:T/U mismatch-specific DNA glycosylase. (165 aa) |
| | FP2_24380 | O-acetylhomoserine sulfhydrolase. (429 aa) |
| | rnz | Metal-dependent hydrolases of the beta-lactamase superfamily III; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (311 aa) |
| | FP2_24440 | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. (256 aa) |
| | FP2_24500 | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (493 aa) |
| | FP2_24510 | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (490 aa) |
| | FP2_24540 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. (523 aa) |
| | FP2_24710 | Sugar kinases, ribokinase family. (276 aa) |
| | FP2_24840 | Cupin domain. (117 aa) |
| | serC | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (360 aa) |
| | FP2_25650 | Protein of unknown function (DUF1703)./Predicted AAA-ATPase. (502 aa) |
| | leuA | Isopropylmalate/homocitrate/citramalate synthases; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (550 aa) |
| | FP2_26280 | Putative virion core protein (lumpy skin disease virus). (432 aa) |
| | FP2_26300 | Beta-propeller domains of methanol dehydrogenase type. (260 aa) |
| | rpsP | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. (80 aa) |
| | FP2_26700 | Dipeptidase A. Cysteine peptidase. MEROPS family C69. (493 aa) |
| | FP2_26780 | ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (310 aa) |
| | FP2_26790 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (350 aa) |
| | FP2_26910 | Uridine kinase. (191 aa) |
| | FP2_27310 | Protein kinase domain. (719 aa) |
| | FP2_27330 | FHA domain. (280 aa) |
| | FP2_27380 | Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain. (440 aa) |
| | FP2_27750 | Hypothetical protein. (120 aa) |
| | FP2_27780 | Cupin domain. (122 aa) |
| | FP2_28040 | Uncharacterized protein conserved in bacteria. (250 aa) |
| | FP2_28070 | Uncharacterized conserved protein related to MYG1 family. (275 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. (313 aa) |
| | argB | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (284 aa) |
| | FP2_28240 | Replication initiator protein A (RepA) N-terminus. (288 aa) |
| | FP2_28480 | DNA primase (bacterial type). (182 aa) |
| | FP2_28580 | Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. (480 aa) |
| | FP2_28630 | AAA domain (dynein-related subfamily). (491 aa) |
