16 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TUBB4A	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (661 aa)
	DCLK1	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. (434 aa)
	TUBB	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
	TTL	Tubulin--tyrosine ligase. (376 aa)
	TUBB2A	Tubulin beta 2A class IIa. (438 aa)
	ENSBMUP00000013034	Tubulin beta-2B chain. (118 aa)
	LOC102281195	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (432 aa)
	ENSBMUP00000015177	Uncharacterized LOC102277577. (378 aa)
	LOC102279692	Uncharacterized protein. (293 aa)
	ENSBMUP00000020296	annotation not available (245 aa)
	STMN4	Stathmin-4. (216 aa)
	LOC102285043	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (444 aa)
	TUBA1A	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (451 aa)
	ENSBMUP00000031193	annotation not available (131 aa)
	ENSBMUP00000031204	Tubulin alpha-1C chain. (247 aa)
	TUBA4A	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (448 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCLK1	ENSBMUP00000013034	ENSBMUP00000000959	ENSBMUP00000013034	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin beta-2B chain.	0.632
DCLK1	ENSBMUP00000015177	ENSBMUP00000000959	ENSBMUP00000015177	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Uncharacterized LOC102277577.	0.721
DCLK1	ENSBMUP00000020296	ENSBMUP00000000959	ENSBMUP00000020296	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	annotation not available	0.648
DCLK1	ENSBMUP00000031193	ENSBMUP00000000959	ENSBMUP00000031193	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	annotation not available	0.648
DCLK1	ENSBMUP00000031204	ENSBMUP00000000959	ENSBMUP00000031204	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin alpha-1C chain.	0.648
DCLK1	LOC102279692	ENSBMUP00000000959	ENSBMUP00000018054	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.900
DCLK1	LOC102281195	ENSBMUP00000000959	ENSBMUP00000013042	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.632
DCLK1	LOC102285043	ENSBMUP00000000959	ENSBMUP00000026915	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.632
DCLK1	TUBA1A	ENSBMUP00000000959	ENSBMUP00000031099	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.648
DCLK1	TUBA4A	ENSBMUP00000000959	ENSBMUP00000035088	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.648
DCLK1	TUBB	ENSBMUP00000000959	ENSBMUP00000009995	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.632
DCLK1	TUBB2A	ENSBMUP00000000959	ENSBMUP00000013019	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin beta 2A class IIa.	0.632
DCLK1	TUBB4A	ENSBMUP00000000959	ENSBMUP00000000389	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.632
ENSBMUP00000013034	DCLK1	ENSBMUP00000013034	ENSBMUP00000000959	Tubulin beta-2B chain.	Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.	0.632
ENSBMUP00000013034	ENSBMUP00000015177	ENSBMUP00000013034	ENSBMUP00000015177	Tubulin beta-2B chain.	Uncharacterized LOC102277577.	0.583
ENSBMUP00000013034	ENSBMUP00000020296	ENSBMUP00000013034	ENSBMUP00000020296	Tubulin beta-2B chain.	annotation not available	0.962
ENSBMUP00000013034	ENSBMUP00000031193	ENSBMUP00000013034	ENSBMUP00000031193	Tubulin beta-2B chain.	annotation not available	0.778
ENSBMUP00000013034	ENSBMUP00000031204	ENSBMUP00000013034	ENSBMUP00000031204	Tubulin beta-2B chain.	Tubulin alpha-1C chain.	0.987
ENSBMUP00000013034	LOC102279692	ENSBMUP00000013034	ENSBMUP00000018054	Tubulin beta-2B chain.	Uncharacterized protein.	0.632
ENSBMUP00000013034	LOC102285043	ENSBMUP00000013034	ENSBMUP00000026915	Tubulin beta-2B chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.464