STRINGSTRING
SF3B2 SF3B2 SART1 SART1 TXNL4B TXNL4B DDX46 DDX46 SF3A3 SF3A3 SF3B6 SF3B6 DDX42 DDX42 SNRPE SNRPE SF3B5 SF3B5 LOC102278219 LOC102278219 SNRNP40 SNRNP40 ENSBMUP00000010437 ENSBMUP00000010437 ENSBMUP00000010468 ENSBMUP00000010468 EFTUD2 EFTUD2 LOC102270308 LOC102270308 SF3B1 SF3B1 PRPF8 PRPF8 SNRPC SNRPC PRPF31 PRPF31 ENSBMUP00000015220 ENSBMUP00000015220 SF3A2 SF3A2 SNRPA1 SNRPA1 M91_19371 M91_19371 SNRNP70 SNRNP70 PHF5A PHF5A ENSBMUP00000022920 ENSBMUP00000022920 TXNL4A TXNL4A SNRPF SNRPF LOC102279927 LOC102279927 LOC106701434 LOC106701434 ENSBMUP00000026353 ENSBMUP00000026353 SNRPB SNRPB ENSBMUP00000027537 ENSBMUP00000027537 ENSBMUP00000027546 ENSBMUP00000027546 SNRPD2 SNRPD2 SNRPG SNRPG SNRPG-2 SNRPG-2 ENSBMUP00000029265 ENSBMUP00000029265 SNRPD1 SNRPD1 SNRPD3 SNRPD3 SF3B3 SF3B3 SNRPA SNRPA DDX23 DDX23 SF3B4 SF3B4 PRPF3 PRPF3 PRPF4 PRPF4 ENSBMUP00000032774 ENSBMUP00000032774 PRPF6 PRPF6 SNRNP200 SNRNP200 SF3A1 SF3A1 M91_01297 M91_01297 SNRPN SNRPN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3B2Splicing factor 3B subunit 2. (813 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (799 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
DDX46ATP-dependent RNA helicase DDX46/PRP5. (1032 aa)
SF3A3Splicing factor 3A subunit 3. (501 aa)
SF3B6Pre-mRNA branch site protein p14. (125 aa)
DDX42ATP-dependent RNA helicase DDX42. (822 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC102278219Small nuclear ribonucleoprotein Sm D1-like. (119 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (359 aa)
ENSBMUP00000010437annotation not available (125 aa)
ENSBMUP00000010468annotation not available (83 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
LOC102270308Splicing factor 3B subunit 4-like. (394 aa)
SF3B1Splicing factor 3B subunit 1. (1304 aa)
PRPF8Pre-mRNA-processing-splicing factor 8. (2335 aa)
SNRPCSmall nuclear ribonucleoprotein polypeptide C. (180 aa)
PRPF31pre-mRNA processing factor 31. (473 aa)
ENSBMUP00000015220annotation not available (93 aa)
SF3A2Splicing factor 3A subunit 2. (477 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (213 aa)
M91_19371Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (93 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa. (189 aa)
PHF5APHD finger-like domain-containing protein 5A. (110 aa)
ENSBMUP00000022920annotation not available (64 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)
LOC102279927Small nuclear ribonucleoprotein Sm D1-like. (119 aa)
LOC106701434Small nuclear ribonucleoprotein F-like. (81 aa)
ENSBMUP00000026353Small nuclear ribonucleoprotein D1. (114 aa)
SNRPBSmall nuclear ribonucleoprotein polypeptides B and B1. (268 aa)
ENSBMUP00000027537annotation not available (51 aa)
ENSBMUP00000027546annotation not available (86 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SNRPGSmall nuclear ribonucleoprotein polypeptide G. (79 aa)
SNRPG-2Small nuclear ribonucleoprotein polypeptide G. (74 aa)
ENSBMUP00000029265annotation not available (87 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
DDX23Putative ATP-dependent RNA helicase DDX23. (820 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3. (683 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein PRP4. (522 aa)
ENSBMUP00000032774annotation not available (81 aa)
PRPF6Pre-mRNA-processing factor 6. (941 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
M91_01297Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein N. (240 aa)
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.