STRINGSTRING
FEN1 FEN1 MUS81 MUS81 RAD51 RAD51 PRIMPOL PRIMPOL FBH1 FBH1 SLX4 SLX4 CHTF8 CHTF8 GINS3 GINS3 FSBP FSBP GINS4 GINS4 RCHY1 RCHY1 POLA2 POLA2 XPA XPA TOP3B TOP3B MSH3 MSH3 RAD1 RAD1 REV1 REV1 POLD3 POLD3 CDC6 CDC6 LOC102276449 LOC102276449 MRE11 MRE11 CDC45 CDC45 MLH1 MLH1 ZRANB3 ZRANB3 MSH2 MSH2 MSH6 MSH6 PCNA PCNA BRIP1 BRIP1 MCM6 MCM6 TOPBP1 TOPBP1 XRCC2 XRCC2 TIPIN TIPIN HUS1 HUS1 RPA3 RPA3 RAD23B RAD23B RMI1 RMI1 BLM BLM ERCC5 ERCC5 BIVM BIVM MLH3 MLH3 MCMBP MCMBP RAD52 RAD52 ORC4 ORC4 ORC5 ORC5 POLD1 POLD1 M91_13835 M91_13835 RECQL5 RECQL5 WDHD1 WDHD1 RPA1 RPA1 NBN NBN ATAD5 ATAD5 ESCO2 ESCO2 SLF1 SLF1 RFC2 RFC2 MCM4 MCM4 ORC6 ORC6 POLK POLK ATRIP ATRIP POLH POLH RFC5 RFC5 MAD2L2 MAD2L2 RAD51B RAD51B ORC3 ORC3 RAD51D RAD51D CDT1 CDT1 ENSBMUP00000017563 ENSBMUP00000017563 PIEZO1 PIEZO1 POLE4 POLE4 BRCA2 BRCA2 RFC3 RFC3 PRIM2 PRIM2 GINS2 GINS2 CDC7 CDC7 MCM5 MCM5 PMS2 PMS2 MCMDC2 MCMDC2 RAD50 RAD50 MSH5 MSH5 RECQL4 RECQL4 GEN1 GEN1 EXO1 EXO1 RAD23A RAD23A TOP3A TOP3A MCM8 MCM8 MSH4 MSH4 POLA1 POLA1 MCM10 MCM10 REV3L REV3L LIG1 LIG1 XPC XPC ORC1 ORC1 RPA2 RPA2 RTEL1 RTEL1 MCM2 MCM2 DDX11 DDX11 RFC4 RFC4 MEIOB MEIOB RHNO1 RHNO1 EME2 EME2 TIMELESS TIMELESS RAD54L RAD54L WRN WRN PRIM1 PRIM1 POLI POLI RFC1 RFC1 BRCA1 BRCA1 ERCC1 ERCC1 ATR ATR RAD9B RAD9B CETN2 CETN2 RAD51C RAD51C MCM3 MCM3 POLD4 POLD4 RAD9A RAD9A POLE2 POLE2 XRCC3 XRCC3 ENSBMUP00000028984 ENSBMUP00000028984 CLSPN CLSPN ENSBMUP00000029030 ENSBMUP00000029030 ERCC4 ERCC4 RBBP8 RBBP8 DBF4 DBF4 POLE POLE EME1 EME1 PMS1 PMS1 BARD1 BARD1 PALB2 PALB2 DNA2 DNA2 POLE3 POLE3 LOC102279735 LOC102279735 CHD1L CHD1L MCM7 MCM7 CHTF18 CHTF18 M91_12513 M91_12513 GINS1 GINS1 MCM9 MCM9 RAD17 RAD17 TDRD3 TDRD3 ENSBMUP00000033156 ENSBMUP00000033156 ENSBMUP00000035179 ENSBMUP00000035179 POLD2 POLD2 SLX1A SLX1A DMC1 DMC1 ORC2 ORC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
MUS81Crossover junction endonuclease MUS81. (583 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
PRIMPOLCoiled-coil domain-containing protein 111. (93 aa)
FBH1F-box only protein 18. (1045 aa)
SLX4Structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12). (1789 aa)
CHTF8Chromosome transmission fidelity protein 8. (121 aa)
GINS3GINS complex subunit 3. (216 aa)
FSBPDNA repair and recombination protein RAD54B. (907 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (223 aa)
RCHY1RING finger and CHY zinc finger domain-containing protein 1. (261 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (600 aa)
XPADNA repair protein complementing XP-A cells. (273 aa)
TOP3BDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (816 aa)
MSH3DNA mismatch repair protein MSH3. (1016 aa)
RAD1Cell cycle checkpoint protein RAD1. (279 aa)
REV1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1257 aa)
POLD3DNA polymerase delta subunit 3. (464 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (560 aa)
LOC102276449Replication protein A 32 kDa subunit. (270 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
CDC45Cell division control protein 45-like protein. (566 aa)
MLH1DNA mismatch repair protein MLH1. (703 aa)
ZRANB3Zinc finger Ran-binding domain-containing protein 3. (1080 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (934 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1360 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (982 aa)
MCM6Minichromosome maintenance complex component 6. (820 aa)
TOPBP1DNA topoisomerase 2-binding protein 1. (1521 aa)
XRCC2DNA repair protein XRCC2. (280 aa)
TIPINTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (290 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (290 aa)
RPA3Replication protein A 14 kDa subunit. (121 aa)
RAD23BUV excision repair protein RAD23-like protein B. (336 aa)
RMI1RecQ-mediated genome instability protein 1. (624 aa)
BLMBloom syndrome protein. (1430 aa)
ERCC5DNA repair protein complementing XP-G cells. (1201 aa)
BIVMBasic, immunoglobulin-like variable motif containing. (502 aa)
MLH3DNA mismatch repair protein MLH3. (1514 aa)
MCMBPUncharacterized protein. (642 aa)
RAD52DNA repair protein RAD52-like protein. (416 aa)
ORC4Origin recognition complex subunit 4. (455 aa)
ORC5Origin recognition complex subunit 5. (435 aa)
POLD1DNA polymerase delta 1, catalytic subunit. (1087 aa)
M91_13835Serine-protein kinase ATM. (319 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (987 aa)
WDHD1WD repeat and HMG-box DNA-binding protein 1. (1127 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
NBNNibrin. (754 aa)
ATAD5ATPase family AAA domain-containing protein 5. (1753 aa)
ESCO2N-acetyltransferase ESCO2. (590 aa)
SLF1Ankyrin repeat domain-containing protein 32. (1055 aa)
RFC2Replication factor C subunit 2. (352 aa)
MCM4DNA helicase; Belongs to the MCM family. (789 aa)
ORC6Origin recognition complex subunit 6. (252 aa)
POLKDNA polymerase kappa. (910 aa)
ATRIPATR interacting protein. (784 aa)
POLHDNA polymerase eta. (710 aa)
RFC5Replication factor C subunit 5. (339 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (209 aa)
RAD51BDNA repair protein RAD51-like protein 2. (365 aa)
ORC3Origin recognition complex subunit 3. (712 aa)
RAD51DRAD51 paralog D. (418 aa)
CDT1DNA replication factor Cdt1. (548 aa)
ENSBMUP00000017563annotation not available (440 aa)
PIEZO1Piezo-type mechanosensitive ion channel component 1/2. (349 aa)
POLE4DNA polymerase epsilon subunit 4. (117 aa)
BRCA2Breast cancer 2 susceptibility protein. (3374 aa)
RFC3Replication factor C subunit 3. (356 aa)
PRIM2DNA primase large subunit. (464 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
CDC7Cell division control protein 7. (576 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
PMS2Mismatch repair endonuclease PMS2. (863 aa)
MCMDC2Uncharacterized protein. (681 aa)
RAD50DNA repair protein RAD50. (1311 aa)
MSH5MutS protein-like protein 5. (832 aa)
RECQL4ATP-dependent DNA helicase Q4. (1210 aa)
GEN1Flap endonuclease GEN-like protein 1. (906 aa)
EXO1Exonuclease 1. (833 aa)
RAD23AUV excision repair protein RAD23-like protein A. (362 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1002 aa)
MCM8DNA replication licensing factor MCM8; Belongs to the MCM family. (832 aa)
MSH4MutS protein-like protein 4. (867 aa)
POLA1DNA polymerase. (1468 aa)
MCM10Protein MCM10-like protein. (871 aa)
REV3LDNA polymerase zeta catalytic subunit. (3055 aa)
LIG1DNA ligase. (883 aa)
XPCDNA repair protein complementing XP-C cells. (923 aa)
ORC1Origin recognition complex subunit 1. (834 aa)
RPA2Replication protein A2. (270 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1207 aa)
MCM2Minichromosome maintenance complex component 2. (840 aa)
DDX11Putative ATP-dependent RNA helicase DDX11. (901 aa)
RFC4Replication factor C subunit 4. (364 aa)
MEIOBUncharacterized protein. (472 aa)
RHNO1Uncharacterized protein. (241 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (379 aa)
TIMELESSProtein timeless-like protein. (1218 aa)
RAD54LDNA repair and recombination protein RAD54-like protein. (749 aa)
WRNWerner syndrome ATP-dependent helicase. (1426 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
POLIDNA polymerase iota. (635 aa)
RFC1Replication factor C subunit 1. (1147 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1828 aa)
ERCC1DNA excision repair protein ERCC-1. (304 aa)
ATRSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2644 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (328 aa)
CETN2Centrin 2. (172 aa)
RAD51CDNA repair protein RAD51-like protein 3. (441 aa)
MCM3Minichromosome maintenance complex component 3. (808 aa)
POLD4DNA polymerase delta subunit 4. (178 aa)
RAD9ARAD9 checkpoint clamp component A. (395 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
XRCC3DNA repair protein XRCC3. (136 aa)
ENSBMUP00000028984annotation not available (309 aa)
CLSPNClaspin. (1334 aa)
ENSBMUP00000029030annotation not available (99 aa)
ERCC4DNA repair endonuclease XPF. (916 aa)
RBBP8DNA endonuclease RBBP8. (859 aa)
DBF4Protein DBF4-like protein A. (674 aa)
POLEDNA polymerase epsilon, catalytic subunit. (2285 aa)
EME1Essential meiotic structure-specific endonuclease 1. (574 aa)
PMS1PMS1 homolog 1, mismatch repair system component. (871 aa)
BARD1BRCA1-associated RING domain protein 1. (773 aa)
PALB2PALB2_WD40 domain-containing protein. (1195 aa)
DNA2DNA replication ATP-dependent helicase Dna2. (1061 aa)
POLE3DNA polymerase epsilon subunit 3. (145 aa)
LOC102279735Serine/threonine-protein kinase Chk1. (227 aa)
CHD1LChromodomain-helicase-DNA-binding protein 1-like protein. (895 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
CHTF18Chromosome transmission fidelity protein 18-like protein. (970 aa)
M91_12513Methylated-DNA--protein-cysteine methyltransferase. (143 aa)
GINS1DNA replication complex GINS protein PSF1. (178 aa)
MCM9DNA replication licensing factor MCM9; Belongs to the MCM family. (1139 aa)
RAD17Cell cycle checkpoint protein RAD17. (708 aa)
TDRD3Tudor domain-containing protein 3. (651 aa)
ENSBMUP00000033156annotation not available (219 aa)
ENSBMUP00000035179annotation not available (199 aa)
POLD2DNA polymerase delta subunit 2. (469 aa)
SLX1ASLX1 homolog A, structure-specific endonuclease subunit. (156 aa)
DMC1Meiotic recombination protein DMC1/LIM15-like protein; Belongs to the RecA family. (340 aa)
ORC2Origin recognition complex subunit 2. (576 aa)
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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