15 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GBA	Glucosylceramidase. (536 aa)
	LOC102282618	N-acetyllactosaminide alpha-1,3-galactosyltransferase. (322 aa)
	GBGT1	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1. (347 aa)
	GLT6D1	Glycosyltransferase 6 domain-containing protein 1. (308 aa)
	ENSBMUP00000007257	annotation not available (367 aa)
	A3GALT2	Alpha 1,3-galactosyltransferase 2. (333 aa)
	SLC35C1	GDP-fucose transporter 1. (364 aa)
	TMEM130	Transmembrane protein 130. (410 aa)
	ABO	Histo-blood group ABO system transferase 1. (377 aa)
	ST3GAL2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (350 aa)
	GBA2	Non-lysosomal glucosylceramidase. (926 aa)
	B4GALNT1	Beta-1,4 N-acetylgalactosaminyltransferase. (533 aa)
	ST3GAL4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family. (365 aa)
	LOC102283181	Glycosyltransferase 6 domain-containing protein 1. (283 aa)
	LOC102282898	N-acetyllactosaminide alpha-1,3-galactosyltransferase. (368 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABO	LOC102282898	ENSBMUP00000029857	ENSBMUP00000004722	Histo-blood group ABO system transferase 1.	N-acetyllactosaminide alpha-1,3-galactosyltransferase.	0.905
GBA	GBA2	ENSBMUP00000016873	ENSBMUP00000032398	Glucosylceramidase.	Non-lysosomal glucosylceramidase.	0.952
GBA2	GBA	ENSBMUP00000032398	ENSBMUP00000016873	Non-lysosomal glucosylceramidase.	Glucosylceramidase.	0.952
LOC102282898	ABO	ENSBMUP00000004722	ENSBMUP00000029857	N-acetyllactosaminide alpha-1,3-galactosyltransferase.	Histo-blood group ABO system transferase 1.	0.905
LOC102282898	ST3GAL4	ENSBMUP00000004722	ENSBMUP00000005302	N-acetyllactosaminide alpha-1,3-galactosyltransferase.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.	0.915
ST3GAL4	LOC102282898	ENSBMUP00000005302	ENSBMUP00000004722	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.	N-acetyllactosaminide alpha-1,3-galactosyltransferase.	0.915