(10 nodes) Microtubule anchoring at centrosome network (Bos mutus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOOK3	Protein Hook-like protein 3. (699 aa)
	CEP19	Uncharacterized protein. (163 aa)
	MAP1S	Microtubule-associated protein 1S. (78 aa)
	ENSBMUP00000035783	Ninein-like protein. (107 aa)
	NIN	Ninein. (2112 aa)
	BBS4	Bardet-Biedl syndrome 4 protein-like protein. (533 aa)
	CCDC120	Coiled-coil domain-containing protein 120. (693 aa)
	CCDC68	Coiled-coil domain-containing protein 68. (335 aa)
	DCTN1	Dynactin subunit 1. (1275 aa)
	PCM1	Pericentriolar material 1 protein. (2022 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	CEP19	ENSBMUP00000010401	ENSBMUP00000028576	Bardet-Biedl syndrome 4 protein-like protein.	Uncharacterized protein.	0.440
BBS4	DCTN1	ENSBMUP00000010401	ENSBMUP00000016623	Bardet-Biedl syndrome 4 protein-like protein.	Dynactin subunit 1.	0.435
BBS4	NIN	ENSBMUP00000010401	ENSBMUP00000011375	Bardet-Biedl syndrome 4 protein-like protein.	Ninein.	0.739
BBS4	PCM1	ENSBMUP00000010401	ENSBMUP00000011643	Bardet-Biedl syndrome 4 protein-like protein.	Pericentriolar material 1 protein.	0.884
CCDC120	CCDC68	ENSBMUP00000005985	ENSBMUP00000025519	Coiled-coil domain-containing protein 120.	Coiled-coil domain-containing protein 68.	0.840
CCDC120	NIN	ENSBMUP00000005985	ENSBMUP00000011375	Coiled-coil domain-containing protein 120.	Ninein.	0.754
CCDC68	CCDC120	ENSBMUP00000025519	ENSBMUP00000005985	Coiled-coil domain-containing protein 68.	Coiled-coil domain-containing protein 120.	0.840
CCDC68	NIN	ENSBMUP00000025519	ENSBMUP00000011375	Coiled-coil domain-containing protein 68.	Ninein.	0.842
CEP19	BBS4	ENSBMUP00000028576	ENSBMUP00000010401	Uncharacterized protein.	Bardet-Biedl syndrome 4 protein-like protein.	0.440
CEP19	NIN	ENSBMUP00000028576	ENSBMUP00000011375	Uncharacterized protein.	Ninein.	0.622
DCTN1	BBS4	ENSBMUP00000016623	ENSBMUP00000010401	Dynactin subunit 1.	Bardet-Biedl syndrome 4 protein-like protein.	0.435
DCTN1	ENSBMUP00000035783	ENSBMUP00000016623	ENSBMUP00000035783	Dynactin subunit 1.	Ninein-like protein.	0.562
DCTN1	NIN	ENSBMUP00000016623	ENSBMUP00000011375	Dynactin subunit 1.	Ninein.	0.517
ENSBMUP00000035783	DCTN1	ENSBMUP00000035783	ENSBMUP00000016623	Ninein-like protein.	Dynactin subunit 1.	0.562
ENSBMUP00000035783	HOOK3	ENSBMUP00000035783	ENSBMUP00000027699	Ninein-like protein.	Protein Hook-like protein 3.	0.401
HOOK3	ENSBMUP00000035783	ENSBMUP00000027699	ENSBMUP00000035783	Protein Hook-like protein 3.	Ninein-like protein.	0.401
HOOK3	NIN	ENSBMUP00000027699	ENSBMUP00000011375	Protein Hook-like protein 3.	Ninein.	0.639
HOOK3	PCM1	ENSBMUP00000027699	ENSBMUP00000011643	Protein Hook-like protein 3.	Pericentriolar material 1 protein.	0.643
NIN	BBS4	ENSBMUP00000011375	ENSBMUP00000010401	Ninein.	Bardet-Biedl syndrome 4 protein-like protein.	0.739
NIN	CCDC120	ENSBMUP00000011375	ENSBMUP00000005985	Ninein.	Coiled-coil domain-containing protein 120.	0.754