30 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CALB2	Calretinin. (271 aa)
	RAB3A	Ras-related protein Rab-3A. (220 aa)
	AP3D1	AP-3 complex subunit delta-1. (1203 aa)
	CPLX3	Complexin-3. (158 aa)
	CPLX2	Complexin-1/2. (142 aa)
	PRSS12	Neurotrypsin; Belongs to the peptidase S1 family. (845 aa)
	GHRH	Somatoliberin. (106 aa)
	BLVRB	Biliverdin reductase B. (237 aa)
	MICAL1	NEDD9-interacting protein with calponin-like protein and LIM domains. (1070 aa)
	OPHN1	Oligophrenin-1. (803 aa)
	CPLX4	Complexin-4. (160 aa)
	NTRK2	Tyrosine-protein kinase receptor. (837 aa)
	SLC18A3	Vesicular acetylcholine transporter. (499 aa)
	AAK1	AP2-associated protein kinase 1. (1297 aa)
	ENSBMUP00000028312	annotation not available (194 aa)
	UNC13B	Protein unc-13-like protein B. (4261 aa)
	UNC13A	Protein unc-13-like protein A. (1720 aa)
	ENSBMUP00000033645	annotation not available (121 aa)
	SLC18A2	Synaptic vesicular amine transporter. (517 aa)
	SCGN	Secretagogin. (276 aa)
	HSPA8	Heat shock protein family A (Hsp70) member 8. (646 aa)
	M91_12283	C2 domain-containing protein. (135 aa)
	LOC102274678	MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2. (274 aa)
	SYP	Synaptophysin. (313 aa)
	TNN	Tenascin-N. (1115 aa)
	UNC13C	Protein unc-13-like protein C. (1701 aa)
	KCNMA1	Calcium-activated potassium channel subunit alpha-1. (1282 aa)
	NMU	Neuromedin-U. (173 aa)
	RAB5A	Ras-related protein Rab-5A. (215 aa)
	CALB1	Calbindin. (261 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALB1	SYP	ENSBMUP00000015811	ENSBMUP00000005560	Calbindin.	Synaptophysin.	0.548
CALB2	SYP	ENSBMUP00000007984	ENSBMUP00000005560	Calretinin.	Synaptophysin.	0.479
CPLX2	CPLX3	ENSBMUP00000019855	ENSBMUP00000019450	Complexin-1/2.	Complexin-3.	0.918
CPLX2	CPLX4	ENSBMUP00000019855	ENSBMUP00000024584	Complexin-1/2.	Complexin-4.	0.916
CPLX3	CPLX2	ENSBMUP00000019450	ENSBMUP00000019855	Complexin-3.	Complexin-1/2.	0.918
CPLX3	CPLX4	ENSBMUP00000019450	ENSBMUP00000024584	Complexin-3.	Complexin-4.	0.900
CPLX4	CPLX2	ENSBMUP00000024584	ENSBMUP00000019855	Complexin-4.	Complexin-1/2.	0.916
CPLX4	CPLX3	ENSBMUP00000024584	ENSBMUP00000019450	Complexin-4.	Complexin-3.	0.900
ENSBMUP00000033645	RAB3A	ENSBMUP00000033645	ENSBMUP00000016253	annotation not available	Ras-related protein Rab-3A.	0.734
ENSBMUP00000033645	RAB5A	ENSBMUP00000033645	ENSBMUP00000011759	annotation not available	Ras-related protein Rab-5A.	0.448
HSPA8	RAB3A	ENSBMUP00000002458	ENSBMUP00000016253	Heat shock protein family A (Hsp70) member 8.	Ras-related protein Rab-3A.	0.758
HSPA8	RAB5A	ENSBMUP00000002458	ENSBMUP00000011759	Heat shock protein family A (Hsp70) member 8.	Ras-related protein Rab-5A.	0.456
LOC102274678	RAB3A	ENSBMUP00000003054	ENSBMUP00000016253	MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2.	Ras-related protein Rab-3A.	0.441
LOC102274678	SLC18A2	ENSBMUP00000003054	ENSBMUP00000035111	MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2.	Synaptic vesicular amine transporter.	0.903
M91_12283	RAB3A	ENSBMUP00000002772	ENSBMUP00000016253	C2 domain-containing protein.	Ras-related protein Rab-3A.	0.438
M91_12283	SLC18A3	ENSBMUP00000002772	ENSBMUP00000026409	C2 domain-containing protein.	Vesicular acetylcholine transporter.	0.528
M91_12283	UNC13C	ENSBMUP00000002772	ENSBMUP00000008616	C2 domain-containing protein.	Protein unc-13-like protein C.	0.899
RAB3A	ENSBMUP00000033645	ENSBMUP00000016253	ENSBMUP00000033645	Ras-related protein Rab-3A.	annotation not available	0.734
RAB3A	HSPA8	ENSBMUP00000016253	ENSBMUP00000002458	Ras-related protein Rab-3A.	Heat shock protein family A (Hsp70) member 8.	0.758
RAB3A	LOC102274678	ENSBMUP00000016253	ENSBMUP00000003054	Ras-related protein Rab-3A.	MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2.	0.441