4 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS35	Vacuolar protein sorting-associated protein 35. (796 aa)
	LOC102284329	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (674 aa)
	VPS26A	Vacuolar protein sorting-associated protein 26A. (302 aa)
	ANKRD27	Ankyrin repeat domain-containing protein 27. (1048 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD27	LOC102284329	ENSBMUP00000025448	ENSBMUP00000013642	Ankyrin repeat domain-containing protein 27.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.429
ANKRD27	VPS35	ENSBMUP00000025448	ENSBMUP00000014915	Ankyrin repeat domain-containing protein 27.	Vacuolar protein sorting-associated protein 35.	0.429
LOC102284329	ANKRD27	ENSBMUP00000013642	ENSBMUP00000025448	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Ankyrin repeat domain-containing protein 27.	0.429
LOC102284329	VPS26A	ENSBMUP00000013642	ENSBMUP00000029175	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Vacuolar protein sorting-associated protein 26A.	0.990
VPS26A	LOC102284329	ENSBMUP00000029175	ENSBMUP00000013642	Vacuolar protein sorting-associated protein 26A.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.990
VPS26A	VPS35	ENSBMUP00000029175	ENSBMUP00000014915	Vacuolar protein sorting-associated protein 26A.	Vacuolar protein sorting-associated protein 35.	0.990
VPS35	ANKRD27	ENSBMUP00000014915	ENSBMUP00000025448	Vacuolar protein sorting-associated protein 35.	Ankyrin repeat domain-containing protein 27.	0.429
VPS35	VPS26A	ENSBMUP00000014915	ENSBMUP00000029175	Vacuolar protein sorting-associated protein 35.	Vacuolar protein sorting-associated protein 26A.	0.990