89 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEC61A1	Protein transport protein Sec61 subunit alpha isoform 1. (481 aa)
	RPL23	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	M91_11584	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	PTGDS	Prostaglandin-H2 D-isomerase; Belongs to the calycin superfamily. Lipocalin family. (275 aa)
	M91_21668	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (101 aa)
	ICMT	Protein-S-isoprenylcysteine O-methyltransferase. (188 aa)
	RPL22	Large subunit ribosomal protein L22e. (129 aa)
	CCDC47	Coiled-coil domain-containing protein 47. (483 aa)
	LOC102273181	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (102 aa)
	RPS17	40S ribosomal protein S17. (135 aa)
	ENSBMUP00000008985	annotation not available (47 aa)
	ENSBMUP00000009098	annotation not available (129 aa)
	LOC102278161	40S ribosomal protein S20-like. (64 aa)
	ENSBMUP00000009564	annotation not available (129 aa)
	PKM	Poly [ADP-ribose] polymerase. (1156 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (152 aa)
	ENSBMUP00000012338	Small subunit ribosomal protein S15Ae. (106 aa)
	ENSBMUP00000012402	annotation not available (52 aa)
	OLFML1	Olfactomedin-like protein 1. (402 aa)
	SEC63	J domain-containing protein. (759 aa)
	RPL32	Ribosomal protein L32. (149 aa)
	ENSBMUP00000014831	annotation not available (130 aa)
	RPL36A	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (142 aa)
	SEC61G	Protein transport protein Sec61 subunit gamma. (68 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	SSR4	Uncharacterized protein. (173 aa)
	ENSBMUP00000016546	annotation not available (142 aa)
	ENSBMUP00000016662	annotation not available (123 aa)
	M91_20669	Uncharacterized protein. (126 aa)
	PLOD1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (726 aa)
	M91_09645	Uncharacterized protein. (56 aa)
	M91_07045	40S ribosomal protein S20. (108 aa)
	SEC61A2	Protein transport protein Sec61 subunit alpha isoform 2. (470 aa)
	ENSBMUP00000018974	annotation not available (60 aa)
	LOC102282611	60S ribosomal protein L27. (76 aa)
	RPS16	Small subunit ribosomal protein S16e. (146 aa)
	SEC62	Uncharacterized protein. (495 aa)
	MACO1	Macoilin. (664 aa)
	CTAGE5	Cutaneous T-cell lymphoma-associated antigen 5. (1409 aa)
	RPL14	60S ribosomal protein L14. (213 aa)
	ENSBMUP00000021610	annotation not available (62 aa)
	RPL18	60S ribosomal protein L18. (188 aa)
	HCRT	Orexin. (131 aa)
	ENSBMUP00000022205	annotation not available (60 aa)
	M91_05648	Uncharacterized protein. (92 aa)
	RPS26	Ribosomal protein S26. (160 aa)
	ENSBMUP00000024659	annotation not available (130 aa)
	ITPR3	Inositol 1,4,5-trisphosphate receptor type 3. (2677 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	M91_20426	Uncharacterized protein. (125 aa)
	TMEM97	Transmembrane protein 97. (176 aa)
	LRAT	Lecithin retinol acyltransferase. (230 aa)
	LOC102271331	60S ribosomal protein L31. (124 aa)
	LOC102267011	Uncharacterized protein. (166 aa)
	EPM2A	Laforin. (193 aa)
	ENSBMUP00000028211	Large subunit ribosomal protein L44e. (137 aa)
	MYOC	Myocilin. (490 aa)
	RPS29-2	Uncharacterized protein. (98 aa)
	RPL31	60S ribosomal protein L31. (129 aa)
	RANGRF	Ran guanine nucleotide release factor. (186 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (142 aa)
	ITPR2	Inositol 1,4,5-trisphosphate receptor type 2. (2701 aa)
	M91_14255	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (117 aa)
	PI4KB	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family. (801 aa)
	ARL6IP1	ADP-ribosylation factor-like protein 6-interacting protein 1. (203 aa)
	RPS15A	40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	M91_19567	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (172 aa)
	M91_11843	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	RPS28	40S ribosomal protein S28. (69 aa)
	ENSBMUP00000034667	annotation not available (96 aa)
	LRPAP1	Alpha-2-macroglobulin receptor-associated protein. (346 aa)
	LOC102271595	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	LOC102281282	60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	ENSBMUP00000003342	annotation not available (63 aa)
	LOC102268193	40S ribosomal protein S26-like. (99 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	ENSBMUP00000002306	annotation not available (53 aa)
	SEC61B	Protein transport protein Sec61 subunit beta. (96 aa)
	ENSBMUP00000007907	annotation not available (57 aa)
	ENSBMUP00000007822	annotation not available (67 aa)
	PARP8	Poly [ADP-ribose] polymerase. (893 aa)
	M91_02959	Uncharacterized protein. (69 aa)
	ZC3H12A	Ribonuclease ZC3H12A. (583 aa)
	SRPRB	Signal recognition particle receptor subunit beta. (271 aa)
	M91_04818	60S ribosomal protein L35. (122 aa)
	SUCO	Protein osteopotentia-like protein. (1253 aa)
	SRPRA	Signal recognition particle receptor subunit alpha. (667 aa)
	RPS15	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	CKAP4	Cytoskeleton-associated protein 4. (546 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL6IP1	ENSBMUP00000002306	ENSBMUP00000033686	ENSBMUP00000002306	ADP-ribosylation factor-like protein 6-interacting protein 1.	annotation not available	0.733
ARL6IP1	ENSBMUP00000007907	ENSBMUP00000033686	ENSBMUP00000007907	ADP-ribosylation factor-like protein 6-interacting protein 1.	annotation not available	0.532
ARL6IP1	ENSBMUP00000009098	ENSBMUP00000033686	ENSBMUP00000009098	ADP-ribosylation factor-like protein 6-interacting protein 1.	annotation not available	0.738
ARL6IP1	ENSBMUP00000016546	ENSBMUP00000033686	ENSBMUP00000016546	ADP-ribosylation factor-like protein 6-interacting protein 1.	annotation not available	0.738
ARL6IP1	ENSBMUP00000021610	ENSBMUP00000033686	ENSBMUP00000021610	ADP-ribosylation factor-like protein 6-interacting protein 1.	annotation not available	0.734
ARL6IP1	ENSBMUP00000022205	ENSBMUP00000033686	ENSBMUP00000022205	ADP-ribosylation factor-like protein 6-interacting protein 1.	annotation not available	0.691
ARL6IP1	ENSBMUP00000028211	ENSBMUP00000033686	ENSBMUP00000028211	ADP-ribosylation factor-like protein 6-interacting protein 1.	Large subunit ribosomal protein L44e.	0.616
ARL6IP1	LOC102267011	ENSBMUP00000033686	ENSBMUP00000027244	ADP-ribosylation factor-like protein 6-interacting protein 1.	Uncharacterized protein.	0.715
ARL6IP1	LOC102268193	ENSBMUP00000033686	ENSBMUP00000002654	ADP-ribosylation factor-like protein 6-interacting protein 1.	40S ribosomal protein S26-like.	0.673
ARL6IP1	LOC102271331	ENSBMUP00000033686	ENSBMUP00000026842	ADP-ribosylation factor-like protein 6-interacting protein 1.	60S ribosomal protein L31.	0.708
ARL6IP1	LOC102271595	ENSBMUP00000033686	ENSBMUP00000035698	ADP-ribosylation factor-like protein 6-interacting protein 1.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.673
ARL6IP1	LOC102273181	ENSBMUP00000033686	ENSBMUP00000008438	ADP-ribosylation factor-like protein 6-interacting protein 1.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.616
ARL6IP1	LOC102278161	ENSBMUP00000033686	ENSBMUP00000009247	ADP-ribosylation factor-like protein 6-interacting protein 1.	40S ribosomal protein S20-like.	0.691
ARL6IP1	LOC102281282	ENSBMUP00000033686	ENSBMUP00000003973	ADP-ribosylation factor-like protein 6-interacting protein 1.	60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.	0.616
ARL6IP1	LOC102282611	ENSBMUP00000033686	ENSBMUP00000018983	ADP-ribosylation factor-like protein 6-interacting protein 1.	60S ribosomal protein L27.	0.657
ARL6IP1	M91_02959	ENSBMUP00000033686	ENSBMUP00000007202	ADP-ribosylation factor-like protein 6-interacting protein 1.	Uncharacterized protein.	0.733
ARL6IP1	M91_04818	ENSBMUP00000033686	ENSBMUP00000006087	ADP-ribosylation factor-like protein 6-interacting protein 1.	60S ribosomal protein L35.	0.715
ARL6IP1	M91_05648	ENSBMUP00000033686	ENSBMUP00000022420	ADP-ribosylation factor-like protein 6-interacting protein 1.	Uncharacterized protein.	0.734
ARL6IP1	M91_07045	ENSBMUP00000033686	ENSBMUP00000017427	ADP-ribosylation factor-like protein 6-interacting protein 1.	40S ribosomal protein S20.	0.691
ARL6IP1	M91_09645	ENSBMUP00000033686	ENSBMUP00000017209	ADP-ribosylation factor-like protein 6-interacting protein 1.	Uncharacterized protein.	0.729