12 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102284329	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (674 aa)
	SNX6	Sorting nexin-6. (282 aa)
	ENSBMUP00000004727	annotation not available (211 aa)
	VPS26B	Vacuolar protein sorting-associated protein 26B. (324 aa)
	ENSBMUP00000033970	annotation not available (90 aa)
	TBC1D5	TBC1 domain family member 5. (319 aa)
	SNX12	Sorting nexin-12. (175 aa)
	VPS26A	Vacuolar protein sorting-associated protein 26A. (302 aa)
	VPS29	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (214 aa)
	DENND4C	DENN domain-containing protein 4. (1949 aa)
	VPS35	Vacuolar protein sorting-associated protein 35. (796 aa)
	ANKFY1	Ankyrin repeat and FYVE domain-containing protein 1. (1170 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKFY1	DENND4C	ENSBMUP00000013787	ENSBMUP00000020320	Ankyrin repeat and FYVE domain-containing protein 1.	DENN domain-containing protein 4.	0.675
ANKFY1	VPS29	ENSBMUP00000013787	ENSBMUP00000027997	Ankyrin repeat and FYVE domain-containing protein 1.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.415
DENND4C	ANKFY1	ENSBMUP00000020320	ENSBMUP00000013787	DENN domain-containing protein 4.	Ankyrin repeat and FYVE domain-containing protein 1.	0.675
ENSBMUP00000004727	LOC102284329	ENSBMUP00000004727	ENSBMUP00000013642	annotation not available	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.528
ENSBMUP00000004727	SNX12	ENSBMUP00000004727	ENSBMUP00000033961	annotation not available	Sorting nexin-12.	0.495
ENSBMUP00000004727	SNX6	ENSBMUP00000004727	ENSBMUP00000005889	annotation not available	Sorting nexin-6.	0.847
ENSBMUP00000004727	VPS26A	ENSBMUP00000004727	ENSBMUP00000029175	annotation not available	Vacuolar protein sorting-associated protein 26A.	0.566
ENSBMUP00000004727	VPS26B	ENSBMUP00000004727	ENSBMUP00000000935	annotation not available	Vacuolar protein sorting-associated protein 26B.	0.639
ENSBMUP00000004727	VPS29	ENSBMUP00000004727	ENSBMUP00000027997	annotation not available	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.572
ENSBMUP00000004727	VPS35	ENSBMUP00000004727	ENSBMUP00000014915	annotation not available	Vacuolar protein sorting-associated protein 35.	0.528
ENSBMUP00000033970	LOC102284329	ENSBMUP00000033970	ENSBMUP00000013642	annotation not available	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.528
ENSBMUP00000033970	SNX12	ENSBMUP00000033970	ENSBMUP00000033961	annotation not available	Sorting nexin-12.	0.495
ENSBMUP00000033970	SNX6	ENSBMUP00000033970	ENSBMUP00000005889	annotation not available	Sorting nexin-6.	0.818
ENSBMUP00000033970	VPS26A	ENSBMUP00000033970	ENSBMUP00000029175	annotation not available	Vacuolar protein sorting-associated protein 26A.	0.566
ENSBMUP00000033970	VPS26B	ENSBMUP00000033970	ENSBMUP00000000935	annotation not available	Vacuolar protein sorting-associated protein 26B.	0.639
ENSBMUP00000033970	VPS29	ENSBMUP00000033970	ENSBMUP00000027997	annotation not available	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.572
ENSBMUP00000033970	VPS35	ENSBMUP00000033970	ENSBMUP00000014915	annotation not available	Vacuolar protein sorting-associated protein 35.	0.528
LOC102284329	ENSBMUP00000004727	ENSBMUP00000013642	ENSBMUP00000004727	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	annotation not available	0.528
LOC102284329	ENSBMUP00000033970	ENSBMUP00000013642	ENSBMUP00000033970	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	annotation not available	0.528
LOC102284329	SNX12	ENSBMUP00000013642	ENSBMUP00000033961	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin-12.	0.840