9 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LAMTOR5	Hepatitis B virus X-interacting protein-like protein. (91 aa)
	M91_09858	Uncharacterized protein. (91 aa)
	ENSBMUP00000009162	annotation not available (89 aa)
	LAMTOR3	Mitogen-activated protein kinase scaffold protein 1. (124 aa)
	LAMTOR2	Mitogen-activated protein-binding protein-interacting protein. (125 aa)
	LAMTOR1	Uncharacterized protein. (161 aa)
	M91_08538	Uncharacterized protein. (91 aa)
	SLC38A9	Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 9. (560 aa)
	LAMTOR4	Uncharacterized protein. (128 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSBMUP00000009162	LAMTOR1	ENSBMUP00000009162	ENSBMUP00000023609	annotation not available	Uncharacterized protein.	0.983
ENSBMUP00000009162	LAMTOR3	ENSBMUP00000009162	ENSBMUP00000011406	annotation not available	Mitogen-activated protein kinase scaffold protein 1.	0.998
ENSBMUP00000009162	LAMTOR4	ENSBMUP00000009162	ENSBMUP00000031865	annotation not available	Uncharacterized protein.	0.967
ENSBMUP00000009162	LAMTOR5	ENSBMUP00000009162	ENSBMUP00000003647	annotation not available	Hepatitis B virus X-interacting protein-like protein.	0.932
ENSBMUP00000009162	M91_08538	ENSBMUP00000009162	ENSBMUP00000029320	annotation not available	Uncharacterized protein.	0.919
ENSBMUP00000009162	M91_09858	ENSBMUP00000009162	ENSBMUP00000006537	annotation not available	Uncharacterized protein.	0.915
ENSBMUP00000009162	SLC38A9	ENSBMUP00000009162	ENSBMUP00000031347	annotation not available	Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 9.	0.951
LAMTOR1	ENSBMUP00000009162	ENSBMUP00000023609	ENSBMUP00000009162	Uncharacterized protein.	annotation not available	0.983
LAMTOR1	LAMTOR2	ENSBMUP00000023609	ENSBMUP00000018646	Uncharacterized protein.	Mitogen-activated protein-binding protein-interacting protein.	0.998
LAMTOR1	LAMTOR3	ENSBMUP00000023609	ENSBMUP00000011406	Uncharacterized protein.	Mitogen-activated protein kinase scaffold protein 1.	0.999
LAMTOR1	LAMTOR4	ENSBMUP00000023609	ENSBMUP00000031865	Uncharacterized protein.	Uncharacterized protein.	0.998
LAMTOR1	LAMTOR5	ENSBMUP00000023609	ENSBMUP00000003647	Uncharacterized protein.	Hepatitis B virus X-interacting protein-like protein.	0.997
LAMTOR1	M91_08538	ENSBMUP00000023609	ENSBMUP00000029320	Uncharacterized protein.	Uncharacterized protein.	0.978
LAMTOR1	M91_09858	ENSBMUP00000023609	ENSBMUP00000006537	Uncharacterized protein.	Uncharacterized protein.	0.973
LAMTOR1	SLC38A9	ENSBMUP00000023609	ENSBMUP00000031347	Uncharacterized protein.	Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 9.	0.998
LAMTOR2	LAMTOR1	ENSBMUP00000018646	ENSBMUP00000023609	Mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.998
LAMTOR2	LAMTOR3	ENSBMUP00000018646	ENSBMUP00000011406	Mitogen-activated protein-binding protein-interacting protein.	Mitogen-activated protein kinase scaffold protein 1.	0.999
LAMTOR2	LAMTOR4	ENSBMUP00000018646	ENSBMUP00000031865	Mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.967
LAMTOR2	LAMTOR5	ENSBMUP00000018646	ENSBMUP00000003647	Mitogen-activated protein-binding protein-interacting protein.	Hepatitis B virus X-interacting protein-like protein.	0.992
LAMTOR2	M91_08538	ENSBMUP00000018646	ENSBMUP00000029320	Mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.919