38 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EPM2A	Laforin. (193 aa)
	LOC102267011	Uncharacterized protein. (166 aa)
	LOC102271331	60S ribosomal protein L31. (124 aa)
	M91_20426	Uncharacterized protein. (125 aa)
	RPS26	Ribosomal protein S26. (160 aa)
	ENSBMUP00000022205	annotation not available (60 aa)
	RPL14	60S ribosomal protein L14. (213 aa)
	RPS16	Small subunit ribosomal protein S16e. (146 aa)
	M91_07045	40S ribosomal protein S20. (108 aa)
	M91_09645	Uncharacterized protein. (56 aa)
	RPL22	Large subunit ribosomal protein L22e. (129 aa)
	ICMT	Protein-S-isoprenylcysteine O-methyltransferase. (188 aa)
	M91_21668	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (101 aa)
	RPL23	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	ENSBMUP00000002306	annotation not available (53 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	LOC102268193	40S ribosomal protein S26-like. (99 aa)
	M91_02959	Uncharacterized protein. (69 aa)
	M91_04818	60S ribosomal protein L35. (122 aa)
	RPS15	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	LOC102281282	60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	RPL36A	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (142 aa)
	RPL32	Ribosomal protein L32. (149 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (152 aa)
	LOC102278161	40S ribosomal protein S20-like. (64 aa)
	ENSBMUP00000009098	annotation not available (129 aa)
	RPS17	40S ribosomal protein S17. (135 aa)
	LOC102273181	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (102 aa)
	ENSBMUP00000016546	annotation not available (142 aa)
	ENSBMUP00000007907	annotation not available (57 aa)
	LOC102271595	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	RPS28	40S ribosomal protein S28. (69 aa)
	M91_19567	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (172 aa)
	M91_14255	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (117 aa)
	RPL31	60S ribosomal protein L31. (129 aa)
	RPS29-2	Uncharacterized protein. (98 aa)
	ENSBMUP00000028211	Large subunit ribosomal protein L44e. (137 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSBMUP00000002306	ENSBMUP00000007907	ENSBMUP00000002306	ENSBMUP00000007907	annotation not available	annotation not available	0.714
ENSBMUP00000002306	ENSBMUP00000009098	ENSBMUP00000002306	ENSBMUP00000009098	annotation not available	annotation not available	0.925
ENSBMUP00000002306	ENSBMUP00000016546	ENSBMUP00000002306	ENSBMUP00000016546	annotation not available	annotation not available	0.925
ENSBMUP00000002306	ENSBMUP00000022205	ENSBMUP00000002306	ENSBMUP00000022205	annotation not available	annotation not available	0.901
ENSBMUP00000002306	ENSBMUP00000028211	ENSBMUP00000002306	ENSBMUP00000028211	annotation not available	Large subunit ribosomal protein L44e.	0.807
ENSBMUP00000002306	LOC102267011	ENSBMUP00000002306	ENSBMUP00000027244	annotation not available	Uncharacterized protein.	0.882
ENSBMUP00000002306	LOC102268193	ENSBMUP00000002306	ENSBMUP00000002654	annotation not available	40S ribosomal protein S26-like.	0.881
ENSBMUP00000002306	LOC102271331	ENSBMUP00000002306	ENSBMUP00000026842	annotation not available	60S ribosomal protein L31.	0.891
ENSBMUP00000002306	LOC102271595	ENSBMUP00000002306	ENSBMUP00000035698	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.887
ENSBMUP00000002306	LOC102273181	ENSBMUP00000002306	ENSBMUP00000008438	annotation not available	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.807
ENSBMUP00000002306	LOC102278161	ENSBMUP00000002306	ENSBMUP00000009247	annotation not available	40S ribosomal protein S20-like.	0.901
ENSBMUP00000002306	LOC102281282	ENSBMUP00000002306	ENSBMUP00000003973	annotation not available	60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.	0.807
ENSBMUP00000002306	M91_04818	ENSBMUP00000002306	ENSBMUP00000006087	annotation not available	60S ribosomal protein L35.	0.882
ENSBMUP00000002306	M91_07045	ENSBMUP00000002306	ENSBMUP00000017427	annotation not available	40S ribosomal protein S20.	0.898
ENSBMUP00000002306	M91_09645	ENSBMUP00000002306	ENSBMUP00000017209	annotation not available	Uncharacterized protein.	0.934
ENSBMUP00000002306	M91_14255	ENSBMUP00000002306	ENSBMUP00000031087	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.896
ENSBMUP00000002306	M91_19567	ENSBMUP00000002306	ENSBMUP00000034484	annotation not available	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.944
ENSBMUP00000002306	M91_20426	ENSBMUP00000002306	ENSBMUP00000025861	annotation not available	Uncharacterized protein.	0.714
ENSBMUP00000002306	M91_21668	ENSBMUP00000002306	ENSBMUP00000000858	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.881
ENSBMUP00000002306	RPL14	ENSBMUP00000002306	ENSBMUP00000021394	annotation not available	60S ribosomal protein L14.	0.940