38 items (Bos mutus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGXT	Serine--pyruvate aminotransferase. (414 aa)
	SHMT1	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (484 aa)
	MOCOS	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. (888 aa)
	ACCS	1-aminocyclopropane-1-carboxylate synthase-like protein 1. (502 aa)
	ACCSL	1-aminocyclopropane-1-carboxylate synthase-like protein 2. (588 aa)
	OAT	Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (439 aa)
	SPTLC3	Serine palmitoyltransferase 3. (549 aa)
	SPTLC1	Serine palmitoyltransferase 1. (473 aa)
	GCAT	2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial. (435 aa)
	LOC102276152	Beta_elim_lyase domain-containing protein. (211 aa)
	NFS1	Cysteine desulfurase, mitochondrial. (457 aa)
	CTH	Cystathionine gamma-lyase. (440 aa)
	SEPSECS	O-phosphoseryl-tRNA(Sec) selenium transferase. (263 aa)
	PHYKPL	Alanine--glyoxylate aminotransferase 2-like 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
	GOT1L1	Putative aspartate aminotransferase, cytoplasmic 2. (407 aa)
	TAT	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (507 aa)
	AGXT2	Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (514 aa)
	GLDC	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1020 aa)
	GAD1	Glutamate decarboxylase 1. (594 aa)
	GOT2	Aspartate aminotransferase. (430 aa)
	GAD2	Glutamate decarboxylase 2. (585 aa)
	ETNPPL	Alanine--glyoxylate aminotransferase 2-like 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (497 aa)
	SPTLC2	Serine palmitoyltransferase 2. (562 aa)
	KYAT3	Kynurenine--oxoglutarate transaminase 3. (455 aa)
	PSAT1	Phosphoserine aminotransferase. (370 aa)
	LOC102287268	Glutamate decarboxylase 1. (554 aa)
	SCLY	Selenocysteine lyase. (452 aa)
	GADL1	Glutamate decarboxylase-like protein 1. (521 aa)
	GOT1	Aspartate aminotransferase. (413 aa)
	AADAT	Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial. (424 aa)
	LOC102270370	Aminotran_1_2 domain-containing protein. (425 aa)
	PDXDC1	Pyridoxal-dependent decarboxylase domain-containing protein 1. (370 aa)
	CSAD	Cysteine sulfinic acid decarboxylase. (494 aa)
	HDC	Histidine decarboxylase. (658 aa)
	SHMT2	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (504 aa)
	ALAS2	5-aminolevulinate synthase. (587 aa)
	SGPL1	Sphingosine-1-phosphate lyase 1. (568 aa)
	DDC	Aromatic-L-amino-acid decarboxylase. (495 aa)

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AADAT	LOC102270370	ENSBMUP00000025533	ENSBMUP00000025573	Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial.	Aminotran_1_2 domain-containing protein.	0.900
ACCS	CTH	ENSBMUP00000016678	ENSBMUP00000012538	1-aminocyclopropane-1-carboxylate synthase-like protein 1.	Cystathionine gamma-lyase.	0.441
ACCSL	CTH	ENSBMUP00000016658	ENSBMUP00000012538	1-aminocyclopropane-1-carboxylate synthase-like protein 2.	Cystathionine gamma-lyase.	0.441
AGXT	AGXT2	ENSBMUP00000014221	ENSBMUP00000005009	Serine--pyruvate aminotransferase.	Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.968
AGXT	ALAS2	ENSBMUP00000014221	ENSBMUP00000035296	Serine--pyruvate aminotransferase.	5-aminolevulinate synthase.	0.918
AGXT	ETNPPL	ENSBMUP00000014221	ENSBMUP00000024162	Serine--pyruvate aminotransferase.	Alanine--glyoxylate aminotransferase 2-like 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.491
AGXT	GCAT	ENSBMUP00000014221	ENSBMUP00000012825	Serine--pyruvate aminotransferase.	2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial.	0.927
AGXT	GLDC	ENSBMUP00000014221	ENSBMUP00000004781	Serine--pyruvate aminotransferase.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.951
AGXT	GOT2	ENSBMUP00000014221	ENSBMUP00000002977	Serine--pyruvate aminotransferase.	Aspartate aminotransferase.	0.420
AGXT	LOC102276152	ENSBMUP00000014221	ENSBMUP00000012672	Serine--pyruvate aminotransferase.	Beta_elim_lyase domain-containing protein.	0.989
AGXT	OAT	ENSBMUP00000014221	ENSBMUP00000014872	Serine--pyruvate aminotransferase.	Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.402
AGXT	PHYKPL	ENSBMUP00000014221	ENSBMUP00000010628	Serine--pyruvate aminotransferase.	Alanine--glyoxylate aminotransferase 2-like 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.491
AGXT	PSAT1	ENSBMUP00000014221	ENSBMUP00000022973	Serine--pyruvate aminotransferase.	Phosphoserine aminotransferase.	0.469
AGXT	SHMT1	ENSBMUP00000014221	ENSBMUP00000020590	Serine--pyruvate aminotransferase.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.986
AGXT	SHMT2	ENSBMUP00000014221	ENSBMUP00000034621	Serine--pyruvate aminotransferase.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.986
AGXT	SPTLC1	ENSBMUP00000014221	ENSBMUP00000012940	Serine--pyruvate aminotransferase.	Serine palmitoyltransferase 1.	0.836
AGXT	SPTLC2	ENSBMUP00000014221	ENSBMUP00000024161	Serine--pyruvate aminotransferase.	Serine palmitoyltransferase 2.	0.836
AGXT	SPTLC3	ENSBMUP00000014221	ENSBMUP00000013933	Serine--pyruvate aminotransferase.	Serine palmitoyltransferase 3.	0.836
AGXT	TAT	ENSBMUP00000014221	ENSBMUP00000007906	Serine--pyruvate aminotransferase.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.455
AGXT2	AGXT	ENSBMUP00000005009	ENSBMUP00000014221	Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Serine--pyruvate aminotransferase.	0.968