7 items (Drosophila ananassae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF19545	Uncharacterized protein. (225 aa)
	DanaGF17479	Uncharacterized protein. (249 aa)
	DanaGF24916	MI domain-containing protein. (847 aa)
	DanaGF12052	Uncharacterized protein. (699 aa)
	DanaGF21010	NUC153 domain-containing protein. (780 aa)
	DanaGF19542	RNA helicase. (841 aa)
	DanaGF19191	RRM domain-containing protein. (201 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF12052	DanaGF17479	B3MCM8	B3LVW4	Uncharacterized protein.	Uncharacterized protein.	0.990
DanaGF12052	DanaGF19191	B3MCM8	B3MZJ9	Uncharacterized protein.	RRM domain-containing protein.	0.971
DanaGF12052	DanaGF19542	B3MCM8	B3MXY6	Uncharacterized protein.	RNA helicase.	0.681
DanaGF12052	DanaGF19545	B3MCM8	A0A0N8P0L8	Uncharacterized protein.	Uncharacterized protein.	0.681
DanaGF12052	DanaGF21010	B3MCM8	B3MRE5	Uncharacterized protein.	NUC153 domain-containing protein.	0.761
DanaGF12052	DanaGF24916	B3MCM8	B3M6P3	Uncharacterized protein.	MI domain-containing protein.	0.769
DanaGF17479	DanaGF12052	B3LVW4	B3MCM8	Uncharacterized protein.	Uncharacterized protein.	0.990
DanaGF17479	DanaGF19191	B3LVW4	B3MZJ9	Uncharacterized protein.	RRM domain-containing protein.	0.990
DanaGF17479	DanaGF19542	B3LVW4	B3MXY6	Uncharacterized protein.	RNA helicase.	0.936
DanaGF17479	DanaGF19545	B3LVW4	A0A0N8P0L8	Uncharacterized protein.	Uncharacterized protein.	0.936
DanaGF17479	DanaGF21010	B3LVW4	B3MRE5	Uncharacterized protein.	NUC153 domain-containing protein.	0.504
DanaGF17479	DanaGF24916	B3LVW4	B3M6P3	Uncharacterized protein.	MI domain-containing protein.	0.962
DanaGF19191	DanaGF12052	B3MZJ9	B3MCM8	RRM domain-containing protein.	Uncharacterized protein.	0.971
DanaGF19191	DanaGF17479	B3MZJ9	B3LVW4	RRM domain-containing protein.	Uncharacterized protein.	0.990
DanaGF19191	DanaGF19542	B3MZJ9	B3MXY6	RRM domain-containing protein.	RNA helicase.	0.938
DanaGF19191	DanaGF19545	B3MZJ9	A0A0N8P0L8	RRM domain-containing protein.	Uncharacterized protein.	0.938
DanaGF19191	DanaGF21010	B3MZJ9	B3MRE5	RRM domain-containing protein.	NUC153 domain-containing protein.	0.974
DanaGF19191	DanaGF24916	B3MZJ9	B3M6P3	RRM domain-containing protein.	MI domain-containing protein.	0.938
DanaGF19542	DanaGF12052	B3MXY6	B3MCM8	RNA helicase.	Uncharacterized protein.	0.681
DanaGF19542	DanaGF17479	B3MXY6	B3LVW4	RNA helicase.	Uncharacterized protein.	0.936