(46 nodes) Myofibril assembly network (Drosophila ananassae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF24342	Uncharacterized protein, isoform J. (434 aa)
	DanaGF15360	Uncharacterized protein, isoform D; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1962 aa)
	DanaGF22375	Uncharacterized protein, isoform I. (397 aa)
	DanaGF22912	Uncharacterized protein, isoform C. (452 aa)
	DanaGF19006	Uncharacterized protein, isoform N. (8966 aa)
	DanaGF21197	Uncharacterized protein, isoform D. (803 aa)
	DanaGF12608	Uncharacterized protein, isoform E. (2006 aa)
	DanaGF11130	Uncharacterized protein, isoform E. (1353 aa)
	DanaGF24939	Uncharacterized protein, isoform F. (16983 aa)
	DanaGF25127	Uncharacterized protein, isoform D. (741 aa)
	DanaGF17864	Uncharacterized protein, isoform B. (2557 aa)
	DanaGF18066	Uncharacterized protein, isoform B. (433 aa)
	DanaGF16118	Uncharacterized protein, isoform F. (4059 aa)
	DanaGF12043	Uncharacterized protein, isoform D. (4237 aa)
	DanaGF13372	Uncharacterized protein, isoform G. (2083 aa)
	DanaGF24935	Uncharacterized protein, isoform E. (3619 aa)
	DanaGF24334	Uncharacterized protein, isoform F. (2848 aa)
	DanaGF20837	Uncharacterized protein, isoform J. (1614 aa)
	DanaGF16196	Uncharacterized protein. (222 aa)
	DanaGF16176	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (220 aa)
	DanaGF18300	Uncharacterized protein. (376 aa)
	DanaGF17920	Calponin-homology (CH) domain-containing protein. (600 aa)
	DanaGF18565	Protein kinase domain-containing protein. (603 aa)
	DanaGF24536	Uncharacterized protein. (892 aa)
	DanaGF10508	Uncharacterized protein, isoform B. (699 aa)
	DanaGF10520	Tudor domain-containing protein. (243 aa)
	DanaGF10148	Uncharacterized protein, isoform A. (879 aa)
	DanaGF10216	Uncharacterized protein, isoform B. (1437 aa)
	DanaGF10833	Uncharacterized protein. (185 aa)
	DanaGF10397	Uncharacterized protein, isoform D. (1684 aa)
	DanaGF23482	WD_REPEATS_REGION domain-containing protein. (608 aa)
	DanaGF13572	Uncharacterized protein, isoform A. (1205 aa)
	DanaGF11829	Uncharacterized protein, isoform A; Belongs to the small heat shock protein (HSP20) family. (187 aa)
	DanaGF13200	Uncharacterized protein. (170 aa)
	DanaGF15354	Uncharacterized protein, isoform A. (1089 aa)
	DanaGF14840	Uncharacterized protein. (2380 aa)
	DanaGF14758	Uncharacterized protein, isoform B. (262 aa)
	DanaGF14192	Uncharacterized protein, isoform C. (840 aa)
	DanaGF21297	Integrin beta; Belongs to the integrin beta chain family. (864 aa)
	DanaGF22287	Uncharacterized protein, isoform A; Belongs to the integrin alpha chain family. (1396 aa)
	DanaGF22497	Uncharacterized protein. (1251 aa)
	DanaGF19521	Uncharacterized protein, isoform C. (208 aa)
	DanaGF22063	Uncharacterized protein, isoform A. (1120 aa)
	DanaGF22006	Uncharacterized protein. (405 aa)
	DanaGF22176	Uncharacterized protein. (1487 aa)
	DanaGF21987	Uncharacterized protein, isoform B. (917 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF10148	DanaGF10508	B3M666	B3M4F1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform B.	0.403
DanaGF10148	DanaGF11130	B3M666	A0A0P8XRL0	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform E.	0.669
DanaGF10148	DanaGF12043	B3M666	A0A0P8Y2W2	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform D.	0.500
DanaGF10148	DanaGF13372	B3M666	A0A0P8ZQ99	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform G.	0.451
DanaGF10148	DanaGF15360	B3M666	A0A0N8NZ56	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform D; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.999
DanaGF10148	DanaGF16196	B3M666	B3LZC8	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.961
DanaGF10148	DanaGF18300	B3M666	B3LZT0	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.632
DanaGF10148	DanaGF19006	B3M666	A0A0P8XJ83	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform N.	0.933
DanaGF10148	DanaGF19521	B3M666	B3MXU5	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.970
DanaGF10148	DanaGF21297	B3M666	B3MRJ4	Uncharacterized protein, isoform A.	Integrin beta; Belongs to the integrin beta chain family.	0.478
DanaGF10148	DanaGF21987	B3M666	B3MYQ6	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform B.	0.947
DanaGF10148	DanaGF22375	B3M666	A0A0N8NZW2	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform I.	0.999
DanaGF10148	DanaGF22912	B3M666	A0A0P8XEE0	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.550
DanaGF10148	DanaGF24334	B3M666	A0A0P9AK05	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform F.	0.611
DanaGF10148	DanaGF24939	B3M666	A0A0P8XSF0	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform F.	0.602
DanaGF10216	DanaGF13372	B3M7C8	A0A0P8ZQ99	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform G.	0.622
DanaGF10216	DanaGF19521	B3M7C8	B3MXU5	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform C.	0.635
DanaGF10216	DanaGF24334	B3M7C8	A0A0P9AK05	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform F.	0.415
DanaGF10508	DanaGF10148	B3M4F1	B3M666	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform A.	0.403
DanaGF10508	DanaGF15360	B3M4F1	A0A0N8NZ56	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform D; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.442