(16 nodes) Synaptic transmission, glutamatergic network (Drosophila ananassae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF14314	Uncharacterized protein. (240 aa)
	DanaGF14315	Uncharacterized protein. (1020 aa)
	DanaGF19004	Uncharacterized protein, isoform H. (1528 aa)
	DanaGF11879	Uncharacterized protein, isoform C. (722 aa)
	DanaGF17996	Uncharacterized protein, isoform B. (919 aa)
	DanaGF19013	Uncharacterized protein, isoform B. (3012 aa)
	DanaGF15571	Uncharacterized protein. (282 aa)
	DanaGF15572	Uncharacterized protein. (906 aa)
	DanaGF20603	Uncharacterized protein. (235 aa)
	DanaGF15573	Uncharacterized protein. (1035 aa)
	DanaGF18325	Uncharacterized protein. (903 aa)
	DanaGF18326	Uncharacterized protein. (883 aa)
	DanaGF17009	Uncharacterized protein. (865 aa)
	DanaGF15508	Uncharacterized protein, isoform A. (640 aa)
	DanaGF15073	Uncharacterized protein. (942 aa)
	DanaGF17583	Uncharacterized protein, isoform A. (233 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF15073	DanaGF15508	B3MM54	B3MLJ2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.840
DanaGF15073	DanaGF15573	B3MM54	B3MMD6	Uncharacterized protein.	Uncharacterized protein.	0.670
DanaGF15073	DanaGF18325	B3MM54	B3M0A5	Uncharacterized protein.	Uncharacterized protein.	0.931
DanaGF15073	DanaGF18326	B3MM54	B3M0A6	Uncharacterized protein.	Uncharacterized protein.	0.938
DanaGF15508	DanaGF15073	B3MLJ2	B3MM54	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.840
DanaGF15508	DanaGF15572	B3MLJ2	B3MMD5	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.725
DanaGF15508	DanaGF15573	B3MLJ2	B3MMD6	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.539
DanaGF15508	DanaGF17009	B3MLJ2	B3M354	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.615
DanaGF15508	DanaGF19013	B3MLJ2	A0A0N8NZJ9	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform B.	0.509
DanaGF15572	DanaGF15508	B3MMD5	B3MLJ2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.725
DanaGF15572	DanaGF15573	B3MMD5	B3MMD6	Uncharacterized protein.	Uncharacterized protein.	0.810
DanaGF15572	DanaGF18325	B3MMD5	B3M0A5	Uncharacterized protein.	Uncharacterized protein.	0.746
DanaGF15572	DanaGF18326	B3MMD5	B3M0A6	Uncharacterized protein.	Uncharacterized protein.	0.743
DanaGF15573	DanaGF15073	B3MMD6	B3MM54	Uncharacterized protein.	Uncharacterized protein.	0.670
DanaGF15573	DanaGF15508	B3MMD6	B3MLJ2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.539
DanaGF15573	DanaGF15572	B3MMD6	B3MMD5	Uncharacterized protein.	Uncharacterized protein.	0.810
DanaGF15573	DanaGF18325	B3MMD6	B3M0A5	Uncharacterized protein.	Uncharacterized protein.	0.947
DanaGF15573	DanaGF18326	B3MMD6	B3M0A6	Uncharacterized protein.	Uncharacterized protein.	0.945
DanaGF17009	DanaGF15508	B3M354	B3MLJ2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.615
DanaGF18325	DanaGF15073	B3M0A5	B3MM54	Uncharacterized protein.	Uncharacterized protein.	0.931